Evidence map›Paper›PMID 27729396›Full record

ArticleThe Plant cell2016

Leaf Growth Response to Mild Drought: Natural Variation in Arabidopsis Sheds Light on Trait Architecture.

Pieter Clauw, Frederik Coppens, Arthur Korte, Dorota Herman, Bram Slabbinck, Stijn Dhondt, Twiggy Van Daele, Liesbeth De Milde, Mattias Vermeersch, Katrien Maleux and 3 more

Abstract read
In one paragraph

Article in The Plant cell, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Antagonistic regulation of nitrogen and drought signaling mediated by NIN-like protein 7 transcription factor inProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  7. Faster vegetative growth inmicroPublication biology · 2026
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Frontiers in plant science · 2024
    Article
  16. Article
  17. Predicting Gene Regulatory Interactions Using Natural Genetic Variation.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Pieter ClauwDepartment of Plant Systems Biology, VIB, Ghent, Belgium.ORCID 0000-0002-9677-8727
Frederik CoppensDepartment of Plant Systems Biology, VIB, Ghent, Belgium.ORCID 0000-0001-6565-5145
Arthur KorteGregor Mendel Institute of Molecular Plant Biology, 1030 Vienna, Austria.ORCID 0000-0003-0831-1463
Dorota HermanDepartment of Plant Systems Biology, VIB, Ghent, Belgium.
Bram SlabbinckDepartment of Plant Systems Biology, VIB, Ghent, Belgium.
Stijn DhondtDepartment of Plant Systems Biology, VIB, Ghent, Belgium.ORCID 0000-0003-4402-2191
Twiggy Van DaeleDepartment of Plant Systems Biology, VIB, Ghent, Belgium.
Liesbeth De MildeDepartment of Plant Systems Biology, VIB, Ghent, Belgium.ORCID 0000-0001-5724-029X
Mattias VermeerschDepartment of Plant Systems Biology, VIB, Ghent, Belgium.ORCID 0000-0003-4173-2366
Katrien MaleuxDepartment of Plant Systems Biology, VIB, Ghent, Belgium.
Steven MaereDepartment of Plant Systems Biology, VIB, Ghent, Belgium.ORCID 0000-0002-5341-136X
Nathalie GonzalezDepartment of Plant Systems Biology, VIB, Ghent, Belgium.ORCID 0000-0002-3946-1758
Dirk InzéDepartment of Plant Systems Biology, VIB, Ghent, Belgium.ORCID 0000-0002-3217-8407

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant growth and crop yield are negatively affected by a reduction in water availability. However, a clear understanding of how growth is regulated under nonlethal drought conditions is lacking. Recent advances in genomics, phenomics, and transcriptomics allow in-depth analysis of natural variation. In this study, we conducted a detailed screening of leaf growth responses to mild drought in a worldwide collection of Arabidopsis thaliana accessions. The genetic architecture of the growth responses upon mild drought was investigated by subjecting the different leaf growth phenotypes to genome-wide association mapping and by characterizing the transcriptome of young developing leaves. Although no major effect locus was found to be associated with growth in mild drought, the transcriptome analysis delivered further insight into the natural variation of transcriptional responses to mild drought in a specific tissue. Coexpression analysis indicated the presence of gene clusters that co-vary over different genetic backgrounds, among others a cluster of genes with important regulatory functions in the growth response to osmotic stress. It was found that the occurrence of a mild drought stress response in leaves can be inferred with high accuracy across accessions based on the expression profile of 283 genes. A genome-wide association study on the expression data revealed that trans regulation seems to be more important than cis regulation in the transcriptional response to environmental perturbations.

Indexed as

DroughtsArabidopsisArabidopsis ProteinsGene Expression ProfilingGene Expression Regulation, PlantGenome-Wide Association StudyPlant LeavesArabidopsis Proteins

Identifiers

PMID27729396
PMCPMC5134983

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.