Evidence map›Paper›PMID 27727328›Full record

ArticlePloS one2016

Targeting of the Plzf Gene in the Rat by Transcription Activator-Like Effector Nuclease Results in Caudal Regression Syndrome in Spontaneously Hypertensive Rats.

František Liška, Renata Peterková, Miroslav Peterka, Vladimír Landa, Václav Zídek, Petr Mlejnek, Jan Šilhavý, Miroslava Šimáková, Vladimír Křen, Colby G Starker and 3 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 3 countries.

František LiškaInstitute of Biology and Medical Genetics, 1st Medical Faculty, Charles University in Prague, Prague, Czech Republic.
Renata PeterkováInstitute of Experimental Medicine, Czech Academy of Sciences, Prague, Czech Republic.
Miroslav PeterkaInstitute of Experimental Medicine, Czech Academy of Sciences, Prague, Czech Republic.
Vladimír LandaInstitute of Physiology, Czech Academy of Sciences, Prague, Czech Republic.
Václav ZídekInstitute of Physiology, Czech Academy of Sciences, Prague, Czech Republic.
Petr MlejnekInstitute of Physiology, Czech Academy of Sciences, Prague, Czech Republic.
Jan ŠilhavýInstitute of Physiology, Czech Academy of Sciences, Prague, Czech Republic.
Miroslava ŠimákováInstitute of Physiology, Czech Academy of Sciences, Prague, Czech Republic.
Vladimír KřenInstitute of Biology and Medical Genetics, 1st Medical Faculty, Charles University in Prague, Prague, Czech Republic.
Colby G StarkerUniversity of Minnesota, Minneapolis, Minnesota, United States of America.
Daniel F VoytasUniversity of Minnesota, Minneapolis, Minnesota, United States of America.
Zsuzsanna IzsvákMax Delbrück Center for Molecular Medicine, Berlin, Germany.
Michal PravenecInstitute of Biology and Medical Genetics, 1st Medical Faculty, Charles University in Prague, Prague, Czech Republic.
Charles University · CZCzech Academy of Sciences · CZCzech Academy of Sciences, Institute of Experimental Medicine · CZCzech Academy of Sciences, Institute of Physiology · CZUniversity of Minnesota · USMax Delbrück Center · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recently, it has been found that spontaneous mutation Lx (polydactyly-luxate syndrome) in the rat is determined by deletion of a conserved intronic sequence of the Plzf (Promyelocytic leukemia zinc finger protein) gene. In addition, Plzf is a prominent candidate gene for quantitative trait loci (QTLs) associated with cardiac hypertrophy and fibrosis in the spontaneously hypertensive rat (SHR). In the current study, we tested the effects of Plzf gene targeting in the SHR using TALENs (transcription activator-like effector nucleases). SHR ova were microinjected with constructs pTAL438/439 coding for a sequence-specific endonuclease that binds to target sequence in the first coding exon of the Plzf gene. Out of 43 animals born after microinjection, we detected a single male founder. Sequence analysis revealed a deletion of G that resulted in frame shift mutation starting in codon 31 and causing a premature stop codon at position of amino acid 58. The Plzftm1Ipcv allele is semi-lethal since approximately 95% of newborn homozygous animals died perinatally. All homozygous animals exhibited manifestations of a caudal regression syndrome including tail anomalies and serious size reduction and deformities of long bones, and oligo- or polydactyly on the hindlimbs. The heterozygous animals only exhibited the tail anomalies. Impaired development of the urinary tract was also revealed: one homozygous and one heterozygous rat exhibited a vesico-ureteric reflux with enormous dilatation of ureters and renal pelvis. In the homozygote, this was combined with a hypoplastic kidney. These results provide evidence for the important role of Plzf gene during development of the caudal part of a body-column vertebrae, hindlimbs and urinary system in the rat.

Indexed as

Abnormalities, MultipleAllelesAmino Acid SequenceAnimalsBase SequenceDNA-Binding ProteinsExonsFrameshift MutationGene TargetingGenotypeHeterozygoteHomozygoteMalePolydactylyPromyelocytic Leukemia Zinc Finger ProteinProtein BindingDNA-Binding ProteinsPromyelocytic Leukemia Zinc Finger ProteinTranscription Activator-Like Effector NucleasesZBTB16 protein, rat

Identifiers

PMID27727328
PMCPMC5058558
OpenAlexW2531329332

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.