Evidence map›Paper›PMID 27726377›Full record

ArticleAnalytical chemistry2016

PCR-Free, Multiplexed Expression Profiling of microRNAs Using Silicon Photonic Microring Resonators.

Richard M Graybill, Christopher S Para, Ryan C Bailey

Abstract readLetter
In one paragraph

Article in Analytical chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Richard M GraybillDepartment of Chemistry, University of Illinois at Urbana-Champaign , 600 S. Matthews Ave., Urbana, Illinois 61801, United States.
Christopher S ParaDepartment of Chemistry, University of Illinois at Urbana-Champaign , 600 S. Matthews Ave., Urbana, Illinois 61801, United States.
Ryan C BaileyDepartment of Chemistry, University of Illinois at Urbana-Champaign , 600 S. Matthews Ave., Urbana, Illinois 61801, United States.

Funding

Training the Next Generation of Researchers in Cancer Nanotechnology at the NCI MR25CA154015 · NCI · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI BASHIR, RASHID, NARDULLI, ANN · 2010 to 2014
$1.5M
Meso-plex miRNA and protein profiling for cancer diagnostics using chip-integrateR33CA177462 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BAILEY, RYAN C, JOHNSON, MARK D · 2013 to 2015
$984k
NCI NIH HHS R25 CA154015NCI NIH HHS R33 CA177462
6 · The paper itself

Abstract

We describe an approach for multiplexed microRNA analysis using silicon photonic microring resonators to detect cDNA reverse transcription products via a subsequent enzymatic signal enhancement strategy. Key to this method is a modified stem loop primer that facilitates downstream signal amplification via enzymatic turnover and improves the sensor signal 20-fold when compared to traditional stem loop primers. This approach facilitates targeted microRNA quantification in only 2.5 h and without requiring target amplification via the polymerase chain reaction (PCR). Primers for 7 miRNA targets were orthogonally designed to avoid cross-hybridization between capture probes. This approach was applied to the detection of total RNA from human tissues and found to display differential expression profiles consistent with literature precedent. This development holds promise as an alternative to single-plex RT-qPCR methods and more expensive RNA-seq by offering a cost-effective method to analyze targeted miRNA panels in emerging diagnostic applications.

Indexed as

Nucleic Acid HybridizationDNA, ComplementaryGene Expression ProfilingHumansLab-On-A-Chip DevicesMicroRNAsPhotonsReverse Transcriptase Polymerase Chain ReactionSiliconDNA, ComplementaryMicroRNAsSilicon

Identifiers

PMID27726377
PMCPMC5812356

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.