Evidence map›Paper›PMID 27726033›Full record

ArticleMicrobial ecology2017

Comparative Assessment of Mediterranean Gorgonian-Associated Microbial Communities Reveals Conserved Core and Locally Variant Bacteria.

Jeroen A J M van de Water, Rémy Melkonian, Christian R Voolstra, Howard Junca, Eric Beraud, Denis Allemand, Christine Ferrier-Pagès

Abstract read
PubMed Publisher
In one paragraph

Article in Microbial ecology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jeroen A J M van de WaterCentre Scientifique de Monaco, 8 Quai Antoine 1, MC 98000, Monaco, Monaco. jvdewater@centrescientifique.mc.
Rémy MelkonianCentre Scientifique de Monaco, 8 Quai Antoine 1, MC 98000, Monaco, Monaco.
Christian R VoolstraRed Sea Research Center, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.
Howard JuncaMicrobiomas Foundation - Division of Ecogenomics & Holobionts, Chia, Colombia.
Eric BeraudCentre Scientifique de Monaco, 8 Quai Antoine 1, MC 98000, Monaco, Monaco.
Denis AllemandCentre Scientifique de Monaco, 8 Quai Antoine 1, MC 98000, Monaco, Monaco.
Christine Ferrier-PagèsCentre Scientifique de Monaco, 8 Quai Antoine 1, MC 98000, Monaco, Monaco.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gorgonians are key habitat-forming species of Mediterranean benthic communities, but their populations have suffered from mass mortality events linked to high summer seawater temperatures and microbial disease. However, our knowledge on the diversity, dynamics and function of gorgonian-associated microbial communities is limited. Here, we analysed the spatial variability of the microbiomes of five sympatric gorgonian species (Eunicella singularis, Eunicella cavolini, Eunicella verrucosa, Leptogorgia sarmentosa and Paramuricea clavata), collected from the Mediterranean Sea over a scale of ∼1100 km, using next-generation amplicon sequencing of the 16S rRNA gene. The microbiomes of all gorgonian species were generally dominated by members of the genus Endozoicomonas, which were at very low abundance in the surrounding seawater. Although the composition of the core microbiome (operational taxonomic units consistently present in a species) was found to be unique for each host species, significant overlap was observed. These spatially consistent associations between gorgonians and their core bacteria suggest intricate symbiotic relationships and regulation of the microbiome composition by the host. At the same time, local variations in microbiome composition were observed. Functional predictive profiling indicated that these differences could be attributed to seawater pollution. Taken together, our data indicate that gorgonian-associated microbiomes are composed of spatially conserved bacteria (core microbiome members) and locally variant members, and that local pollution may influence these local associations, potentially impacting gorgonian health.

Indexed as

MicrobiotaAnimalsAnthozoaBacteriaBase SequenceBiodiversityClassificationCoral ReefsDNA, BacterialGene LibraryMediterranean SeaPhylogenyRNA, Ribosomal, 16SSeasonsSeawaterSpecies SpecificityDNA, BacterialRNA, Ribosomal, 16S16S rRNA geneBacterial communityCoralEndozoicomonasEvolutionGorgonianHolobiont

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.