Evidence map›Paper›PMID 27725787›Full record

ArticleDisease markers2016

Concentration and Methylation of Cell-Free DNA from Blood Plasma as Diagnostic Markers of Renal Cancer.

Inessa Skrypkina, Liudmyla Tsyba, Kateryna Onyshchenko, Dmytro Morderer, Olena Kashparova, Oleksii Nikolaienko, Grigory Panasenko, Sergii Vozianov, Alina Romanenko, Alla Rynditch

Open access · hybridAbstract read
In one paragraph

Article in Disease markers, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed, 1 pooled it
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 1 synthesis or guideline pooled it, 78 citations in OpenAlex.

  1. Pooled it
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  7. Article
  8. Review
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  10. Article
  11. Review
  12. Circulating cell-free DNA for cancer early detection.Innovation (Cambridge (Mass.)) · 2022
    Review
  13. Review
  14. Article
  15. Article
  16. Epigenetic Biomarkers of Renal Cell Carcinoma for Liquid Biopsy Tests.International journal of molecular sciences · 2021
    Review
  17. Epigenetically inactivated RASSF1A as a tumor biomarker.Bosnian journal of basic medical sciences · 2021
    Review
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Inessa SkrypkinaDepartment of Functional Genomics, Institute of Molecular Biology and Genetics of the National Academy of Science of Ukraine, Kyiv, Ukraine.ORCID 0000-0003-0529-6069
Liudmyla TsybaDepartment of Functional Genomics, Institute of Molecular Biology and Genetics of the National Academy of Science of Ukraine, Kyiv, Ukraine.
Kateryna OnyshchenkoDepartment of Functional Genomics, Institute of Molecular Biology and Genetics of the National Academy of Science of Ukraine, Kyiv, Ukraine.
Dmytro MordererDepartment of Functional Genomics, Institute of Molecular Biology and Genetics of the National Academy of Science of Ukraine, Kyiv, Ukraine.ORCID 0000-0003-3413-1597
Olena KashparovaDepartment of Functional Genomics, Institute of Molecular Biology and Genetics of the National Academy of Science of Ukraine, Kyiv, Ukraine.
Oleksii NikolaienkoDepartment of Functional Genomics, Institute of Molecular Biology and Genetics of the National Academy of Science of Ukraine, Kyiv, Ukraine.
Grigory PanasenkoDepartment of Molecular Oncogenetics, Institute of Molecular Biology and Genetics of the National Academy of Science of Ukraine, Kyiv, Ukraine.
Sergii VozianovInstitute of Urology, National Academy of Medical Sciences of Ukraine, Kyiv, Ukraine.
Alina RomanenkoInstitute of Urology, National Academy of Medical Sciences of Ukraine, Kyiv, Ukraine.
Alla RynditchDepartment of Functional Genomics, Institute of Molecular Biology and Genetics of the National Academy of Science of Ukraine, Kyiv, Ukraine.
Institute of Molecular Biology and Genetics · UAState Institution «Academician O.F.Vozianov Institute of Urology of the National Academy of Medical Sciences of Ukraine» · UA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The critical point for successful treatment of cancer is diagnosis at early stages of tumor development. Cancer cell-specific methylated DNA has been found in the blood of cancer patients, indicating that cell-free DNA (cfDNA) circulating in the blood is a convenient tumor-associated DNA marker. Therefore methylated cfDNA can be used as a minimally invasive diagnostic marker. We analysed the concentration of plasma cfDNA and methylation of six tumor suppressor genes in samples of 27 patients with renal cancer and 15 healthy donors as controls. The cfDNA concentrations in samples from cancer patients and healthy donors was measured using two different methods, the SYBR Green I fluorescence test and quantitative real-time PCR. Both methods revealed a statistically significant increase of cfDNA concentrations in cancer patients. Hypermethylation on cfDNA was detected for the

Indexed as

DNA MethylationAcid Anhydride HydrolasesAdenomatous Polyposis Coli ProteinBiomarkers, TumorBis(5'-adenosyl)triphosphataseCarcinoma, Renal CellCase-Control StudiesCpG IslandsDNA, NeoplasmFemaleHumansKidney NeoplasmsMaleMiddle AgedNeoplasm ProteinsPromoter Regions, GeneticAcid Anhydride HydrolasesAdenomatous Polyposis Coli ProteinAPC protein, humanBiomarkers, TumorBis(5'-adenosyl)triphosphataseDNA, NeoplasmLRRC3B protein, humanNeoplasm ProteinsRASSF1 protein, humanTumor Suppressor Proteins

Identifiers

PMID27725787
PMCPMC5048037
OpenAlexW2522860892

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.