ArticleBMC plant biology2016
Strand-specific RNA-Seq transcriptome analysis of genotypes with and without low-phosphorus tolerance provides novel insights into phosphorus-use efficiency in maize.
Article in BMC plant biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.
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Who cites it
26 citing papers in PubMed.
- Integrating RNA-Seq and Metabolomic Perspectives Reveals the Mechanism of Response to Phosphorus Stress ofPlants (Basel, Switzerland) · 2025Article
- Anthocyanin Synthesis Capability of Maize Cultivars Is Associated with Their Photosynthetic Carbon Partitioning for Growth Adaptability Under Low Phosphorus.Plants (Basel, Switzerland) · 2025Article
- Exploring the dynamic adaptive responses of Epimedium pubescens to phosphorus deficiency by Integrated transcriptome and miRNA analysis.BMC plant biology · 2024Article
- Facilitating Growth of Maize (Journal of agricultural and food chemistry · 2024Article
- Genetics and metabolic responses of Artemisia annua L to the lake of phosphorus under the sparingly soluble phosphorus fertilizer: evidence from transcriptomics analysis.Functional & integrative genomics · 2024Article
- Genome-Wide Association Study for Maize Hybrid Performance in a Typical Breeder Population.International journal of molecular sciences · 2024Article
- Multi-locus genome-wide association study for phosphorus use efficiency in a tropical maize germplasm.Frontiers in plant science · 2024Article
- Role ofInternational journal of molecular sciences · 2023Article
- Maize Genotypes Sensitive and Tolerant to Low Phosphorus Levels Exhibit Different Transcriptome Profiles underInternational journal of molecular sciences · 2023Article
- Phosphate Deficiency: A Tale from the End of PILNCR2.Non-coding RNA · 2023Article
- RNA sequencing in Artemisia annua L explored the genetic and metabolic responses to hardly soluble aluminum phosphate treatment.Functional & integrative genomics · 2023Article
- Physiological and Transcriptomic Analyses Uncover the Reason for the Inhibition of Photosynthesis by Phosphate Deficiency inInternational journal of molecular sciences · 2022Article
- Article
- High transcriptome plasticity drives phosphate starvation responses in tomato.Stress biology · 2022Article
- Pi-starvation induced transcriptional changes in barley revealed by a comprehensive RNA-Seq and degradome analyses.BMC genomics · 2021Article
- Comparative transcriptome analysis reveals novel insights into transcriptional responses to phosphorus starvation in oil palm (Elaeis guineensis) root.BMC genomic data · 2021Article
- Omics-Facilitated Crop Improvement for Climate Resilience and Superior Nutritive Value.Frontiers in plant science · 2021Review
- Scion genotypes exert long distance control over rootstock transcriptome responses to low phosphate in grafted grapevine.BMC plant biology · 2020Article
- Metabolic alterations provide insights into Stylosanthes roots responding to phosphorus deficiency.BMC plant biology · 2020Article
- Differential Gene Expression Responding to Low Phosphate Stress in Leaves and Roots of Maize by cDNA-SRAP.BioMed research international · 2020Article
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7 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundPhosphorus (P) stress is a global problem in maize production. Although macro/microarray technologies have greatly increased our general knowledge of maize responses to P stress, a greater understanding of the diversity of responses in maize genotypes is still needed.
resultsIn this study, we first evaluated the tolerance to low P of 560 accessions under field conditions, and selected the low P-tolerant line CCM454 and the low P-sensitive line 31778 for further research. We then generated 24 strand-specific RNA libraries from shoots and roots of CCM454 and 31778 that had been subjected to P stress for 2 and 8 days. The P deficiency-responsive genes common to CCM454 and 31778 were involved in various metabolic processes, including acid phosphatase (APase) activity. Determination of root-secretory APase activities showed that the induction of APase by P stress occurred much earlier in CCM454 than that in 31778. Gene Ontology analysis of differentially expressed genes (DEGs) and CAT/POD activities between CCM454 and 31778 under P-sufficient and -deficient conditions demonstrated that CCM454 has a greater ability to eliminate reactive oxygen species (ROS) than 31778. In addition, 16 miRNAs in roots and 12 miRNAs in shoots, including miRNA399s, were identified as DEGs between CCM454 and 31778.
conclusionsThe results indicate that the tolerance to low P of CCM454 is mainly due to the rapid responsiveness to P stress and efficient elimination of ROS. Our findings increase the understanding of the molecular events involved in the diversity of responses to P stress among maize accessions.
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