Evidence map›Paper›PMID 27723854›Full record

ArticleIntegrative biology : quantitative biosciences from nano to macro2016

High content image analysis of focal adhesion-dependent mechanosensitive stem cell differentiation.

Andrew W Holle, Alistair J McIntyre, Jared Kehe, Piyumi Wijesekara, Jennifer L Young, Ludovic G Vincent, Adam J Engler

Open access · bronzeAbstract read
In one paragraph

Article in Integrative biology : quantitative biosciences from nano to macro, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 23 citations in OpenAlex.

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  14. Stem cell migration and mechanotransduction on linear stiffness gradient hydrogels.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Andrew W HolleDepartment of Bioengineering, University of California, 9500 Gilman Drive, MC 0695, La Jolla, San Diego, CA, USA. aengler@ucsd.edu.ORCID 0000-0002-7206-0964
Alistair J McIntyreDepartment of Bioengineering, University of California, 9500 Gilman Drive, MC 0695, La Jolla, San Diego, CA, USA. aengler@ucsd.edu.
Jared KeheDepartment of Bioengineering, University of California, 9500 Gilman Drive, MC 0695, La Jolla, San Diego, CA, USA. aengler@ucsd.edu.
Piyumi WijesekaraDepartment of Bioengineering, University of California, 9500 Gilman Drive, MC 0695, La Jolla, San Diego, CA, USA. aengler@ucsd.edu.
Jennifer L YoungDepartment of Bioengineering, University of California, 9500 Gilman Drive, MC 0695, La Jolla, San Diego, CA, USA. aengler@ucsd.edu.
Ludovic G VincentDepartment of Bioengineering, University of California, 9500 Gilman Drive, MC 0695, La Jolla, San Diego, CA, USA. aengler@ucsd.edu.
Adam J EnglerDepartment of Bioengineering, University of California, 9500 Gilman Drive, MC 0695, La Jolla, San Diego, CA, USA. aengler@ucsd.edu and Sanford Consortium for Regenerative Medicine, La Jolla, CA 92093, USA.
University of California System · US

Funding

"Smart" Materials to Engineer a More Complete Stem Cell NicheDP2OD006460 · OD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ENGLER, ADAM J · 2009 to 2009
$2.3M
NIH HHS DP2 OD006460
6 · The paper itself

Abstract

Human mesenchymal stem cells (hMSCs) receive differentiation cues from a number of stimuli, including extracellular matrix (ECM) stiffness. The pathways used to sense stiffness and other physical cues are just now being understood and include proteins within focal adhesions. To rapidly advance the pace of discovery for novel mechanosensitive proteins, we employed a combination of in silico and high throughput in vitro methods to analyze 47 different focal adhesion proteins for cryptic kinase binding sites. High content imaging of hMSCs treated with small interfering RNAs for the top 6 candidate proteins showed novel effects on both osteogenic and myogenic differentiation; Vinculin and SORBS1 were necessary for stiffness-mediated myogenic and osteogenic differentiation, respectively. Both of these proteins bound to MAPK1 (also known as ERK2), suggesting that it plays a context-specific role in mechanosensing for each lineage; validation for these sites was performed. This high throughput system, while specifically built to analyze stiffness-mediated stem cell differentiation, can be expanded to other physical cues to more broadly assess mechanical signaling and increase the pace of sensor discovery.

Indexed as

Cell DifferentiationCells, CulturedFocal AdhesionsHumansImage EnhancementMAP Kinase Signaling SystemMechanotransduction, CellularMesenchymal Stem CellsMolecular ImagingProteomeStress, MechanicalProteome

Identifiers

PMID27723854
PMCPMC5079280
OpenAlexW2512798226

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.