Evidence map›Paper›PMID 27723751›Full record

ArticleNature chemical biology2016

Nuclear receptors control pro-viral and antiviral metabolic responses to hepatitis C virus infection.

Gahl Levy, Naomi Habib, Maria Angela Guzzardi, Daniel Kitsberg, David Bomze, Elishai Ezra, Basak E Uygun, Korkut Uygun, Martin Trippler, Joerg F Schlaak and 6 more

Abstract read
In one paragraph

Article in Nature chemical biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 52 citations in OpenAlex.

  1. Trial
  2. HBV/HCV coinfection and anti-tuberculosis drug-induced liver injury: from risk assessment and exploration of mechanisms to preventive considerations.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2026
    Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Metabolic Reprogramming of HCC: A New Microenvironment for Immune Responses.International journal of molecular sciences · 2023
    Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. A Review of Emerging Goose Astrovirus Causing Gout.BioMed research international · 2022
    Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Liver-expressedScience advances · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 7 institutions in 4 countries.

Gahl LevyGrass Center for Bioengineering, Benin School of Computer Science and Engineering, The Hebrew University of Jerusalem, Jerusalem, Israel.
Naomi HabibGrass Center for Bioengineering, Benin School of Computer Science and Engineering, The Hebrew University of Jerusalem, Jerusalem, Israel.
Maria Angela GuzzardiGrass Center for Bioengineering, Benin School of Computer Science and Engineering, The Hebrew University of Jerusalem, Jerusalem, Israel.
Daniel KitsbergGrass Center for Bioengineering, Benin School of Computer Science and Engineering, The Hebrew University of Jerusalem, Jerusalem, Israel.
David BomzeGrass Center for Bioengineering, Benin School of Computer Science and Engineering, The Hebrew University of Jerusalem, Jerusalem, Israel.
Elishai EzraGrass Center for Bioengineering, Benin School of Computer Science and Engineering, The Hebrew University of Jerusalem, Jerusalem, Israel.ORCID http://orcid.org/0000-0003-1304-8022
Basak E UygunCenter for Engineering in Medicine, Massachusetts General Hospital, Boston, Massachusetts, USA.
Korkut UygunCenter for Engineering in Medicine, Massachusetts General Hospital, Boston, Massachusetts, USA.
Martin TripplerDepartment of Gastroenterology and Hepatology, University Hospital, University Duisburg-Essen, Essen, Germany.
Joerg F SchlaakDepartment of Gastroenterology and Hepatology, University Hospital, University Duisburg-Essen, Essen, Germany.
Oren ShiboletLiver Unit, Department of Gastroenterology, Tel-Aviv Medical Center and Sackler Faculty of Medicine, Tel Aviv, Israel.
Ella H SklanDepartment of Clinical Microbiology and Immunology, Sackler School of Medicine, Tel Aviv University, Tel Aviv, Israel.
Merav CohenGrass Center for Bioengineering, Benin School of Computer Science and Engineering, The Hebrew University of Jerusalem, Jerusalem, Israel.
Joerg TimmInstitute for Virology, Medical Faculty, University of Düsseldorf, Düsseldorf, Germany.ORCID http://orcid.org/0000-0001-7799-3045
Nir FriedmanGrass Center for Bioengineering, Benin School of Computer Science and Engineering, The Hebrew University of Jerusalem, Jerusalem, Israel.
Yaakov NahmiasGrass Center for Bioengineering, Benin School of Computer Science and Engineering, The Hebrew University of Jerusalem, Jerusalem, Israel.
Hebrew University of Jerusalem · ILMassachusetts General Hospital · USTel Aviv University · ILUniversity of Duisburg-Essen · DEBroad Institute · USHeinrich Heine University Düsseldorf · DEJerusalem College of Technology · IL

Funding

Gene Network Based Differentiation of Stem Cells in a Microfabricated ArrayK01DK080241 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI NAHMIAS, YAAKOV · 2008 to 2012
$727k
NIDDK NIH HHS K01 DK080241
6 · The paper itself

Abstract

Viruses lack the basic machinery needed to replicate and therefore must hijack the host's metabolism to propagate. Virus-induced metabolic changes have yet to be systematically studied in the context of host transcriptional regulation, and such studies shoul offer insight into host-pathogen metabolic interplay. In this work we identified hepatitis C virus (HCV)-responsive regulators by coupling system-wide metabolic-flux analysis with targeted perturbation of nuclear receptors in primary human hepatocytes. We found HCV-induced upregulation of glycolysis, ketogenesis and drug metabolism, with glycolysis controlled by activation of HNF4α, ketogenesis by PPARα and FXR, and drug metabolism by PXR. Pharmaceutical inhibition of HNF4α reversed HCV-induced glycolysis, blocking viral replication while increasing apoptosis in infected cells showing virus-induced dependence on glycolysis. In contrast, pharmaceutical inhibition of PPARα or FXR reversed HCV-induced ketogenesis but increased viral replication, demonstrating a novel host antiviral response. Our results show that virus-induced changes to a host's metabolism can be detrimental to its life cycle, thus revealing a biologically complex relationship between virus and host.

Indexed as

Host-Pathogen InteractionsGlycolysisHepacivirusHepatitis CHepatocytesHumansReceptors, Cytoplasmic and NuclearReceptors, Cytoplasmic and Nuclear

Identifiers

PMID27723751
PMCPMC7046487
OpenAlexW2531604762

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.