Evidence map›Paper›PMID 27723749›Full record

ArticleNature chemical biology2016

SF2312 is a natural phosphonate inhibitor of enolase.

Paul G Leonard, Nikunj Satani, David Maxwell, Yu-Hsi Lin, Naima Hammoudi, Zhenghong Peng, Federica Pisaneschi, Todd M Link, Gilbert R Lee, Duoli Sun and 8 more

Open access · greenAbstract read
In one paragraph

Article in Nature chemical biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 99 citations in OpenAlex.

  1. Review
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  9. The intersection of hostMicrobiology and molecular biology reviews : MMBR · 2024
    Review
  10. Article
  11. BeyondMolecular therapy oncolytics · 2023
    Review
  12. Enolase Inhibitors as Early Lead Therapeutics againstPathogens (Basel, Switzerland) · 2023
    Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 3 institutions in 1 country.

Paul G Leonard *Department of Genomic Medicine and Core for Biomolecular Structure and Function, University of Texas MD Anderson Cancer Center, Houston, TX 77054.
Nikunj Satani *Department of Cancer Systems Imaging, University of Texas MD Anderson Cancer Center, Houston, TX 77054.
David MaxwellDepartment of Clinical Analytics & Informatics, Houston, TX 77054-3403.
Yu-Hsi LinDepartment of Cancer Systems Imaging, University of Texas MD Anderson Cancer Center, Houston, TX 77054.
Naima HammoudiDepartment of Cancer Systems Imaging, University of Texas MD Anderson Cancer Center, Houston, TX 77054.
Zhenghong PengCardtronics, Inc., Houston, TX 77042.
Federica PisaneschiDepartment of Cancer Systems Imaging, University of Texas MD Anderson Cancer Center, Houston, TX 77054.
Todd M LinkDepartment of Genomic Medicine and Core for Biomolecular Structure and Function, University of Texas MD Anderson Cancer Center, Houston, TX 77054.
Gilbert R LeeDepartment of Genomic Medicine and Core for Biomolecular Structure and Function, University of Texas MD Anderson Cancer Center, Houston, TX 77054.
Duoli SunDepartment of Genomic Medicine and Core for Biomolecular Structure and Function, University of Texas MD Anderson Cancer Center, Houston, TX 77054.
Basvoju A Bhanu PrasadDepartment of Genomic Medicine and Core for Biomolecular Structure and Function, University of Texas MD Anderson Cancer Center, Houston, TX 77054.
Maria Emilia Di FrancescoInstitute for Applied Cancer Science, University of Texas MD Anderson Cancer Center, Houston, TX 77054.
Barbara CzakoInstitute for Applied Cancer Science, University of Texas MD Anderson Cancer Center, Houston, TX 77054.
John M AsaraDepartment of Medicine, Beth Israel Deaconess Medical Center and Harvard Medical School, Boston, MA 02115.
Y Alan WangDepartment of Cancer Biology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA University of Texas MD Anderson Cancer Center, Houston, TX 77054 USA.
William BornmannBayou Therapeutics, Inc, Missouri City, TX 77459-3028.
Ronald A DePinhoDepartment of Cancer Biology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA University of Texas MD Anderson Cancer Center, Houston, TX 77054 USA.
Florian L MullerDepartment of Cancer Systems Imaging, University of Texas MD Anderson Cancer Center, Houston, TX 77054.
The University of Texas MD Anderson Cancer Center · USBayou Biolabs · USBeth Israel Deaconess Medical Center · US

Funding

VectorP30CA006516 · NCI · DANA-FARBER CANCER INSTITUTE · PI Deborah J Goff · 1985 to 2026
$330.6M
Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Kathrin Milbury · 1985 to 2026
$290.8M
Tropism Enhanced Oncolytic Adenovirus for the Treatment of Brain TumorsP50CA127001 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI FREDERICK F LANG · 2008 to 2026
$41.2M
Tuberous Sclerosis-Pathway and PathogenesisP01CA120964 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI David J. Kwiatkowski · 2007 to 2026
$35.9M
Transgenic Mouse and Biobank CoreP01CA095616 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI BRENNAN, CAMERON · 2003 to 2012
$20.3M
NCI NIH HHS P01 CA095616NCI NIH HHS P01 CA120964NCI NIH HHS P30 CA006516NCI NIH HHS P30 CA016672NCI NIH HHS P50 CA127001
6 · The paper itself

Abstract

Despite being crucial for energy generation in most forms of life, few if any microbial antibiotics specifically inhibit glycolysis. To develop a specific inhibitor of the glycolytic enzyme enolase 2 (ENO2) for the treatment of cancers with deletion of ENO1 (encoding enolase 1), we modeled the synthetic tool compound inhibitor phosphonoacetohydroxamate (PhAH) into the active site of human ENO2. A ring-stabilized analog of PhAH, in which the hydroxamic nitrogen is linked to Cα by an ethylene bridge, was predicted to increase binding affinity by stabilizing the inhibitor in a bound conformation. Unexpectedly, a structure-based search revealed that our hypothesized backbone-stabilized PhAH bears strong similarity to SF2312, a phosphonate antibiotic of unknown mode of action produced by the actinomycete Micromonospora, which is active under anaerobic conditions. Here, we present multiple lines of evidence, including a novel X-ray structure, that SF2312 is a highly potent, low-nanomolar inhibitor of enolase.

Indexed as

Dose-Response Relationship, DrugEnzyme InhibitorsHumansModels, MolecularMolecular StructureOrganophosphonatesPhosphopyruvate HydratasePyrrolidinonesStructure-Activity Relationship(1,5-dihydroxy-2-oxopyrrolidin-3-yl)phosphonic acidEnzyme InhibitorsOrganophosphonatesPhosphopyruvate HydratasePyrrolidinones

Identifiers

PMID27723749
PMCPMC5110371
OpenAlexW2530003115

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.