Evidence map›Paper›PMID 27716291›Full record

ArticleMicrobial cell factories2016

Enzymatic fine-tuning for 2-(6-hydroxynaphthyl) β-D-xylopyranoside synthesis catalyzed by the recombinant β-xylosidase BxTW1 from Talaromyces amestolkiae.

Manuel Nieto-Domínguez, Alicia Prieto, Beatriz Fernández de Toro, Francisco Javier Cañada, Jorge Barriuso, Zach Armstrong, Stephen G Withers, Laura I de Eugenio, María Jesús Martínez

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

  1. Expression and Characterization of Two α-l-Arabinofuranosidases fromInternational journal of molecular sciences · 2023
    Article
  2. Article
  3. Lytic Polysaccharide Monooxygenase fromInternational journal of molecular sciences · 2021
    Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Manuel Nieto-DomínguezDepartment of Environmental Biology, Centro de Investigaciones Biológicas, CSIC, Ramiro de Maeztu 9, 28040, Madrid, Spain.
Alicia PrietoDepartment of Environmental Biology, Centro de Investigaciones Biológicas, CSIC, Ramiro de Maeztu 9, 28040, Madrid, Spain.
Beatriz Fernández de ToroDepartment of Chemical and Physical Biology, Centro de Investigaciones Biológicas, CSIC, Ramiro de Maeztu 9, 28040, Madrid, Spain.
Francisco Javier CañadaDepartment of Chemical and Physical Biology, Centro de Investigaciones Biológicas, CSIC, Ramiro de Maeztu 9, 28040, Madrid, Spain.
Jorge BarriusoDepartment of Environmental Biology, Centro de Investigaciones Biológicas, CSIC, Ramiro de Maeztu 9, 28040, Madrid, Spain.
Zach ArmstrongDepartment of Chemistry, Centre for High-Throughput Biology, University of British Columbia, Vancouver, Canada.
Stephen G WithersDepartment of Chemistry, Centre for High-Throughput Biology, University of British Columbia, Vancouver, Canada.
Laura I de EugenioDepartment of Environmental Biology, Centro de Investigaciones Biológicas, CSIC, Ramiro de Maeztu 9, 28040, Madrid, Spain. lidem@cib.csic.es.
María Jesús MartínezDepartment of Environmental Biology, Centro de Investigaciones Biológicas, CSIC, Ramiro de Maeztu 9, 28040, Madrid, Spain. mjmartinez@cib.csic.es.
Centro de Investigaciones Biológicas Margarita Salas · ESUniversity of British Columbia · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundGlycosides are compounds displaying crucial biological roles and plenty of applications. Traditionally, these molecules have been chemically obtained, but its efficient production is limited by the lack of regio- and stereo-selectivity of the chemical synthesis. As an interesting alternative, glycosidases are able to catalyze the formation of glycosides in a process considered green and highly selective. In this study, we report the expression and characterization of a fungal β-xylosidase in Pichia pastoris. The transglycosylation potential of the enzyme was evaluated and its applicability in the synthesis of a selective anti-proliferative compound demonstrated.

resultsThe β-xylosidase BxTW1 from the ascomycete fungus Talaromyces amestolkiae was cloned and expressed in Pichia pastoris GS115. The yeast secreted 8 U/mL of β-xylosidase that was purified by a single step of cation-exchange chromatography. rBxTW1 in its active form is an N-glycosylated dimer of about 200 kDa. The enzyme was biochemically characterized displaying a K

conclusionsA β-xylosidase from T. amestolkiae was produced in P. pastoris and purified. The final yields were much higher than those attained for the native protein, although some loss of stability and maximum velocity was observed. rBxTW1 displayed remarkable acceptor versatility in transxylosylation, catalyzing the synthesis of a selective antiproliferative compound, 2-(6-hydroxynaphthyl) β-D-xylopyranoside. These results evidence the interest of rBxTW1 for transxylosylation of relevant products with biotechnological interest.

Indexed as

Amino Acid SequenceBiocatalysisGlycosidesGlycosylationHydrogen-Ion ConcentrationKineticsMagnetic Resonance SpectroscopyNaphtholsPichiaSubstrate SpecificityTalaromycesXyloseXylosidases2-(6-hydroxynaphthyl)-O-beta-D-xylopyranosideexo-1,4-beta-D-xylosidaseGlycosidesNaphtholsXyloseXylosidases2-(6-hydroxynaphthyl) β-D-xylopyranosideBox-Behnken designN-GlycosylationPichia pastorisResponse surface methodologyTransxylosylationβ-Xylosidase

Identifiers

PMID27716291
PMCPMC5050587
OpenAlexW2528494739

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.