Evidence map›Paper›PMID 27713965›Full record

ArticleFood & function2016

Dietary resistant starch type 4-derived butyrate attenuates nuclear factor-kappa-B1 through modulation of histone H3 trimethylation at lysine 27.

Yi Liu, Bijaya Upadhyaya, Ali Reza Fardin-Kia, Robert M Juenemann, Moul Dey

Open access · greenAbstract read
In one paragraph

Article in Food & function, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Yi LiuDepartment of Health and Nutritional Sciences, Box 2203, South Dakota State University, Brookings, SD 57007, USA. Moul.Dey@sdstate.edu.
Bijaya UpadhyayaDepartment of Health and Nutritional Sciences, Box 2203, South Dakota State University, Brookings, SD 57007, USA. Moul.Dey@sdstate.edu.
Ali Reza Fardin-KiaOffice of Regulatory Science, Center for Food Safety and Applied Nutrition, HFS-717, US Food and Drug Administration, College Park, MD 20740, USA.
Robert M JuenemannDepartment of Health and Nutritional Sciences, Box 2203, South Dakota State University, Brookings, SD 57007, USA. Moul.Dey@sdstate.edu.
Moul DeyDepartment of Health and Nutritional Sciences, Box 2203, South Dakota State University, Brookings, SD 57007, USA. Moul.Dey@sdstate.edu.
Brookings Institution · USCenter for Food Safety and Applied Nutrition · USNutrition Sciences (Belgium) · BE

Funding

An alternate therapy for treatment of IBD and prevention of colon cancerR00AT004245 · NCCIH · SOUTH DAKOTA STATE UNIVERSITY · PI DEY, MOUL · 2010 to 2012
$682k
NCCIH NIH HHS R00 AT004245
6 · The paper itself

Abstract

Indigestible resistant starches (RS) are substrates for gut-microbial metabolism and have been shown to attenuate intestinal inflammation but the supporting evidence is inconsistent and lacks mechanistic explanation. We have recently reported dietary RS type 4 (RS4) induced improvements in immunometabolic functions in humans and a concomitant increase in butyrogenic gut-bacteria. Since inflammation is a key component in metabolic diseases, here we investigated the effects of RS4-derived butyrate on the epigenetic repression of pro-inflammatory genes in vivo and in vitro. RS4-fed mice, compared to the control-diet group, had higher cecal butyrate and increased tri-methylation of lysine 27 on histone 3 (H3K27me3) in the promoter of nuclear factor-kappa-B1 (NFκB1) in the colon tissue. The H3K27me3-enrichment inversely correlated with the concentration dependent down-regulation of NFκB1 in sodium butyrate treated human colon epithelial cells. Two additional inflammatory genes were attenuated by sodium butyrate, but were not linked with H3K27me3 changes. This exploratory study presents a new opportunity for studying underlying H3K27me3 and other methylation modifying mechanisms linked to RS4 biological activity.

Indexed as

AnimalsBacteriaButyric AcidCecumCell LineDietary CarbohydratesGastrointestinal MicrobiomeHistonesHumansLysineMaleMethylationMiceNF-kappa BPromoter Regions, GeneticStarchButyric AcidDietary CarbohydratesHistonesLysineNF-kappa BStarch

Identifiers

PMID27713965
PMCPMC5084454
OpenAlexW2511299558

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.