Evidence map›Paper›PMID 27713552›Full record

ArticleScientific reports2016

Differential transcriptional responses to Ebola and Marburg virus infection in bat and human cells.

Martin Hölzer, Verena Krähling, Fabian Amman, Emanuel Barth, Stephan H Bernhart, Victor A O Carmelo, Maximilian Collatz, Gero Doose, Florian Eggenhofer, Jan Ewald and 29 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
6.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 60 citations in OpenAlex.

  1. Article
  2. Ebola virus exploits host lncRNAbioRxiv : the preprint server for biology · 2026
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  13. Genetic Examination of Hematological Parameters in SARS-CoV-2 Infection and COVID-19.medRxiv : the preprint server for health sciences · 2022
    Article
  14. Article
  15. Article
  16. Article
  17. Bat-borne virus diversity, spillover and emergence.Nature reviews. Microbiology · 2020
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

39 authors at 14 institutions in 7 countries.

Martin HölzerRNA Bioinformatics and High Throughput Analysis, Faculty of Mathematics and Computer Science, Friedrich Schiller University Jena, Leutragraben 1, 07743, Jena, Germany.
Verena KrählingInstitute of Virology, Philipps University Marburg, Hans-Meerwein-Str. 2, 35043 Marburg, Germany.
Fabian AmmanBioinformatics Group, Department of Computer Science, University of Leipzig, Härtelstraße 16-18, 04107, Leipzig, Germany.
Emanuel BarthRNA Bioinformatics and High Throughput Analysis, Faculty of Mathematics and Computer Science, Friedrich Schiller University Jena, Leutragraben 1, 07743, Jena, Germany.
Stephan H BernhartTranscriptome Bioinformatics, Junior Research Group, Leipzig Research Center for Civilization Diseases, University of Leipzig, Härtelstraße 16-18, 04107, Leipzig, Germany.
Victor A O CarmeloCenter for non-coding RNA in Technology and Health, University of Copenhagen, Grønnegårdsvej 3, 1870, Frederiksberg C, Denmark.
Maximilian CollatzRNA Bioinformatics and High Throughput Analysis, Faculty of Mathematics and Computer Science, Friedrich Schiller University Jena, Leutragraben 1, 07743, Jena, Germany.
Gero DooseTranscriptome Bioinformatics, Junior Research Group, Leipzig Research Center for Civilization Diseases, University of Leipzig, Härtelstraße 16-18, 04107, Leipzig, Germany.
Florian EggenhoferTheoretical Biochemistry Group, Institute of Theoretical Chemistry, University of Vienna, Währingerstraße 17, 1090, Vienna, Austria.
Jan EwaldResearch Group Theoretical Systems Biology, Department of Bioinformatics, Friedrich Schiller University Jena, Ernst-Abbe-Platz 2, 07743, Jena, Germany.
Jörg FallmannBioinformatics Group, Department of Computer Science, University of Leipzig, Härtelstraße 16-18, 04107, Leipzig, Germany.
Lasse M FeldhahnInstitute of Computer Science, Martin-Luther University Halle-Wittenberg, Von-Seckendorff-Platz 1, 06120, Halle/Saale, Germany.
Markus FrickeRNA Bioinformatics and High Throughput Analysis, Faculty of Mathematics and Computer Science, Friedrich Schiller University Jena, Leutragraben 1, 07743, Jena, Germany.
Juliane GebauerResearch Group Theoretical Systems Biology, Department of Bioinformatics, Friedrich Schiller University Jena, Ernst-Abbe-Platz 2, 07743, Jena, Germany.
Andreas J GruberBiozentrum, University of Basel, Klingelbergstraße 50/70, CH-4056, Basel, Switzerland.
Franziska HufskyRNA Bioinformatics and High Throughput Analysis, Faculty of Mathematics and Computer Science, Friedrich Schiller University Jena, Leutragraben 1, 07743, Jena, Germany.
Henrike IndrischekBioinformatics Group, Department of Computer Science, University of Leipzig, Härtelstraße 16-18, 04107, Leipzig, Germany.
Sabina KantonTFome Research Group, Bioinformatics Group, Interdisciplinary Center of Bioinformatics, Department of Computer Science, University of Leipzig, Härtelstraße 16-18, 04107, Leipzig, Germany.
Jörg LindeLeibniz Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI), Systems Biology and Bioinformatics, Beutenbergstraße 11a, 07745, Jena, Germany.
Nelly MostajoRNA Bioinformatics and High Throughput Analysis, Faculty of Mathematics and Computer Science, Friedrich Schiller University Jena, Leutragraben 1, 07743, Jena, Germany.
Roman OchsenreiterTheoretical Biochemistry Group, Institute of Theoretical Chemistry, University of Vienna, Währingerstraße 17, 1090, Vienna, Austria.
Konstantin RiegeRNA Bioinformatics and High Throughput Analysis, Faculty of Mathematics and Computer Science, Friedrich Schiller University Jena, Leutragraben 1, 07743, Jena, Germany.
Lorena Rivarola-DuarteBioinformatics Group, Department of Computer Science, University of Leipzig, Härtelstraße 16-18, 04107, Leipzig, Germany.
Abdullah H SahyounRNA Bioinformatics and High Throughput Analysis, Faculty of Mathematics and Computer Science, Friedrich Schiller University Jena, Leutragraben 1, 07743, Jena, Germany.
Sita J SaundersBioinformatics Group, Department of Computer Science, University of Freiburg, Georges-Köhler-Allee 106, 79110, Freiburg, Germany.
Stefan E SeemannCenter for non-coding RNA in Technology and Health, University of Copenhagen, Grønnegårdsvej 3, 1870, Frederiksberg C, Denmark.
Andrea TanzerTheoretical Biochemistry Group, Institute of Theoretical Chemistry, University of Vienna, Währingerstraße 17, 1090, Vienna, Austria.
Bertram VogelRNA Bioinformatics and High Throughput Analysis, Faculty of Mathematics and Computer Science, Friedrich Schiller University Jena, Leutragraben 1, 07743, Jena, Germany.
Stefanie WehnerRNA Bioinformatics and High Throughput Analysis, Faculty of Mathematics and Computer Science, Friedrich Schiller University Jena, Leutragraben 1, 07743, Jena, Germany.
Michael T WolfingerTheoretical Biochemistry Group, Institute of Theoretical Chemistry, University of Vienna, Währingerstraße 17, 1090, Vienna, Austria.
Rolf BackofenCenter for non-coding RNA in Technology and Health, University of Copenhagen, Grønnegårdsvej 3, 1870, Frederiksberg C, Denmark.
Jan GorodkinCenter for non-coding RNA in Technology and Health, University of Copenhagen, Grønnegårdsvej 3, 1870, Frederiksberg C, Denmark.
Ivo GrosseInstitute of Computer Science, Martin-Luther University Halle-Wittenberg, Von-Seckendorff-Platz 1, 06120, Halle/Saale, Germany.
Ivo HofackerCenter for non-coding RNA in Technology and Health, University of Copenhagen, Grønnegårdsvej 3, 1870, Frederiksberg C, Denmark.
Steve HoffmannTranscriptome Bioinformatics, Junior Research Group, Leipzig Research Center for Civilization Diseases, University of Leipzig, Härtelstraße 16-18, 04107, Leipzig, Germany.
Christoph KaletaResearch Group Medical Systems Biology, Institute for Experimental Medicine, Christian-Albrechts-University Kiel, Brunswiker Str. 10, 24105, Kiel, Germany.
Peter F StadlerBioinformatics Group, Department of Computer Science, University of Leipzig, Härtelstraße 16-18, 04107, Leipzig, Germany.
Stephan BeckerInstitute of Virology, Philipps University Marburg, Hans-Meerwein-Str. 2, 35043 Marburg, Germany.
Manja MarzRNA Bioinformatics and High Throughput Analysis, Faculty of Mathematics and Computer Science, Friedrich Schiller University Jena, Leutragraben 1, 07743, Jena, Germany.
Friedrich Schiller University Jena · DEUniversity of Copenhagen · DKPhilipps University of Marburg · DEUniversity of Vienna · ATHelmholtz Centre for Environmental Research · DELeipzig University · DELeibniz Association · DEChristian-Albrechts-Universität zu Kiel · DELebanese University · LBLeibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. - Hans-Knöll-Institut (HKI) · DETelstra (Australia) · AUUniversity of Basel · CHUniversity of Freiburg · DEUniversity of Stirling · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The unprecedented outbreak of Ebola in West Africa resulted in over 28,000 cases and 11,000 deaths, underlining the need for a better understanding of the biology of this highly pathogenic virus to develop specific counter strategies. Two filoviruses, the Ebola and Marburg viruses, result in a severe and often fatal infection in humans. However, bats are natural hosts and survive filovirus infections without obvious symptoms. The molecular basis of this striking difference in the response to filovirus infections is not well understood. We report a systematic overview of differentially expressed genes, activity motifs and pathways in human and bat cells infected with the Ebola and Marburg viruses, and we demonstrate that the replication of filoviruses is more rapid in human cells than in bat cells. We also found that the most strongly regulated genes upon filovirus infection are chemokine ligands and transcription factors. We observed a strong induction of the JAK/STAT pathway, of several genes encoding inhibitors of MAP kinases (DUSP genes) and of PPP1R15A, which is involved in ER stress-induced cell death. We used comparative transcriptomics to provide a data resource that can be used to identify cellular responses that might allow bats to survive filovirus infections.

Indexed as

Gene Expression RegulationSignal TransductionTranscription, GeneticAnimalsCell Line, TumorChiropteraEbolavirusHemorrhagic Fever, EbolaHumansMarburgvirusMarburg Virus Disease

Identifiers

PMID27713552
PMCPMC5054393
OpenAlexW2527837002

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.