Evidence map›Paper›PMID 27710940›Full record

ArticleActa crystallographica. Section F, Structural biology communications2016

The structure of a glycoside hydrolase 29 family member from a rumen bacterium reveals unique, dual carbohydrate-binding domains.

Emma L Summers, Christina D Moon, Renee Atua, Vickery L Arcus

Abstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Biochemical characterization of Fsa16295Glu fromFrontiers in microbiology · 2024
    Article
  4. Review
  5. Article
  6. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Emma L SummersBiological Sciences, The University of Waikato, Private Bag 3105, Hamilton 3240, New Zealand.
Christina D MoonHealth and Animal Science, AgResearch, Grasslands Research Centre, Tennent Drive, Palmerston North 4442, New Zealand.
Renee AtuaHealth and Animal Science, AgResearch, Grasslands Research Centre, Tennent Drive, Palmerston North 4442, New Zealand.
Vickery L ArcusBiological Sciences, The University of Waikato, Private Bag 3105, Hamilton 3240, New Zealand.
AgResearch · NZUniversity of Waikato · NZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glycoside hydrolase (GH) family 29 consists solely of α-L-fucosidases. These enzymes catalyse the hydrolysis of glycosidic bonds. Here, the structure of GH29_0940, a protein cloned from metagenomic DNA from the rumen of a cow, has been solved, which reveals a multi-domain arrangement that has only recently been identified in bacterial GH29 enzymes. The microbial species that provided the source of this enzyme is unknown. This enzyme contains a second carbohydrate-binding domain at its C-terminal end in addition to the typical N-terminal catalytic domain and carbohydrate-binding domain arrangement of GH29-family proteins. GH29_0940 is a monomer and its overall structure consists of an N-terminal TIM-barrel-like domain, a central β-sandwich domain and a C-terminal β-sandwich domain. The TIM-barrel-like catalytic domain exhibits a (β/α)

Indexed as

MetagenomeAmino Acid SequenceAnimalsCarbohydratesCatalytic DomainCattleCloning, MolecularCrystallography, X-RayEscherichia coliFemaleGastrointestinal MicrobiomeGene ExpressionGlycoside HydrolasesHydrolysisModels, MolecularPlasmidsCarbohydratesGlycoside HydrolasesRecombinant Proteinscarbohydrate-binding domainCBM32GH29glycoside hydrolasePDB5K9Hα-l-fucosidase

Identifiers

PMID27710940
PMCPMC5053160
OpenAlexW2521535507

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.