Evidence map›Paper›PMID 27710906›Full record

ReviewCurrent opinion in genetics & development2016

Explosive genetic evidence for explosive human population growth.

Feng Gao, Alon Keinan

Abstract readReview
In one paragraph

Review in Current opinion in genetics & development, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

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  11. INDEX-db: The Indian Exome Reference Database (Phase I).Journal of computational biology : a journal of computational molecular cell biology · 2019
    Article
  12. Exact limits of inference in coalescent models.Theoretical population biology · 2019
    Article
  13. Article
  14. Population genomic analysis of elongated skulls reveals extensive female-biased immigration in Early Medieval Bavaria.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Feng GaoDepartment of Biological Statistics and Computational Biology, Ithaca, NY 14850, United States.
Alon KeinanDepartment of Biological Statistics and Computational Biology, Ithaca, NY 14850, United States. Electronic address: alon.keinan@cornell.edu.

Funding

The X-factor of complex disease: From population genetics to GWAS of Chromosome XR01HG006849 · NHGRI · CORNELL UNIVERSITY · PI CLARK, ANDREW G · 2013 to 2020
$2.3M
Population Genetic Consequences of Recent Explosive Population Growth in HumansR01GM108805 · NIGMS · CORNELL UNIVERSITY · PI CLARK, ANDREW G, KEINAN, ALON · 2014 to 2017
$2.2M
NHGRI NIH HHS R01 HG006849NIGMS NIH HHS R01 GM108805
6 · The paper itself

Abstract

The advent of next-generation sequencing technology has allowed the collection of vast amounts of genetic variation data. A recurring discovery from studying larger and larger samples of individuals had been the extreme, previously unexpected, excess of very rare genetic variants, which has been shown to be mostly due to the recent explosive growth of human populations. Here, we review recent literature that inferred recent changes in population size in different human populations and with different methodologies, with many pointing to recent explosive growth, especially in European populations for which more data has been available. We also review the state-of-the-art methods and software for the inference of historical population size changes that lead to these discoveries. Finally, we discuss the implications of recent population growth on personalized genomics, on purifying selection in the non-equilibrium state it entails and, as a consequence, on the genetic architecture underlying complex disease and the performance of mapping methods in discovering rare variants that contribute to complex disease risk.

Indexed as

Genetics, PopulationGenetic Predisposition to DiseaseGenome, HumanHigh-Throughput Nucleotide SequencingHumansPolymorphism, Single NucleotidePopulation GrowthSelection, GeneticWhite People

Identifiers

PMID27710906
PMCPMC5161661

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.