Evidence map›Paper›PMID 27708373›Full record

ArticleScientific reports2016

GlycoMine

Fuyi Li, Chen Li, Jerico Revote, Yang Zhang, Geoffrey I Webb, Jian Li, Jiangning Song, Trevor Lithgow

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed, 1 pooled it
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 1 synthesis or guideline pooled it, 81 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Functions of Glycosylation and Related Web Resources for Its Prediction.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  12. Computational analysis and prediction of PE_PGRS proteins using machine learning.Computational and structural biotechnology journal · 2022
    Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Glycosylation in Axonal Guidance.International journal of molecular sciences · 2021
    Review
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Fuyi LiCollege of Information Engineering, Northwest A&F University, Yangling 712100, China.
Chen LiInfection and Immunity Program, Biomedicine Discovery Institute and Department of Biochemistry and Molecular Biology, Monash University, Melbourne, VIC 3800, Australia.
Jerico RevoteMonash Bioinformatics Platform, Monash University, Melbourne, VIC 3800, Australia.
Yang ZhangCollege of Information Engineering, Northwest A&F University, Yangling 712100, China.
Geoffrey I WebbMonash Centre for Data Science, Faculty of Information Technology, Monash University, Melbourne, VIC 3800, Australia.
Jian LiInfection and Immunity Program, Biomedicine Discovery Institute and Department of Microbiology, Monash University, Melbourne, VIC 3800, Australia.
Jiangning SongInfection and Immunity Program, Biomedicine Discovery Institute and Department of Biochemistry and Molecular Biology, Monash University, Melbourne, VIC 3800, Australia.
Trevor LithgowInfection and Immunity Program, Biomedicine Discovery Institute and Department of Microbiology, Monash University, Melbourne, VIC 3800, Australia.
Monash University · AUChinese Academy of Sciences · CNNorthwest A&F University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glycosylation plays an important role in cell-cell adhesion, ligand-binding and subcellular recognition. Current approaches for predicting protein glycosylation are primarily based on sequence-derived features, while little work has been done to systematically assess the importance of structural features to glycosylation prediction. Here, we propose a novel bioinformatics method called GlycoMine

Indexed as

Computational BiologyGlycoproteinsProteomeSoftwareGlycosylationHumansSequence Analysis, ProteinGlycoproteinsProteome

Identifiers

PMID27708373
PMCPMC5052564
OpenAlexW2528774686

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.