Evidence map›Paper›PMID 27707434›Full record

ArticleInternational journal of systematic and evolutionary microbiology2016

Identification and taxonomic characterization of Bordetella pseudohinzii sp. nov. isolated from laboratory-raised mice.

Yury V Ivanov, Bodo Linz, Karen B Register, Jeffrey D Newman, Dawn L Taylor, Kenneth R Boschert, Soazig Le Guyon, Emily F Wilson, Lauren M Brinkac, Ravi Sanka and 4 more

Open access · hybridAbstract read
In one paragraph

Article in International journal of systematic and evolutionary microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
4.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 44 citations in OpenAlex.

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  10. Natural History and Ecology of Interactions BetweenFrontiers in cellular and infection microbiology · 2022
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  11. Probing Immune-Mediated Clearance of Acute Middle Ear Infection in Mice.Frontiers in cellular and infection microbiology · 2021
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  14. Peripancreatic abscess supported byNew microbes and new infections · 2020
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  15. Frontiers in cellular and infection microbiology · 2020
    Review
  16. Evolution and Conservation ofFrontiers in microbiology · 2020
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  17. Isolation and characterization ofAnimal models and experimental medicine · 2019
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  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 8 institutions in 2 countries.

Yury V IvanovDepartment of Veterinary and Biomedical Sciences, Pennsylvania State University, University Park, PA, USA.
Bodo LinzDepartment of Veterinary and Biomedical Sciences, Pennsylvania State University, University Park, PA, USA.
Karen B RegisterUnited States Department of Agriculture, Agricultural Research Service, National Animal Disease Center, Ames, IA, USA.
Jeffrey D NewmanDepartment of Biology, Lycoming College, Williamsport, PA, USA.
Dawn L TaylorDepartment of Veterinary and Biomedical Sciences, Pennsylvania State University, University Park, PA, USA.
Kenneth R BoschertDivision of Comparative Medicine, Washington University, St. Louis, MO, USA.
Soazig Le GuyonLee Kong Chian School of Medicine and Singapore Centre on Environmental Life Sciences Engineering, Nanyang Technological University, Singapore, Singapore.
Emily F WilsonDepartment of Veterinary and Biomedical Sciences, Pennsylvania State University, University Park, PA, USA.
Lauren M BrinkacJ. Craig Venter Institute, Rockville, MD, USA.
Ravi SankaJ. Craig Venter Institute, Rockville, MD, USA.
Suellen C GrecoDivision of Comparative Medicine, Washington University, St. Louis, MO, USA.
Paula M KlenderDivision of Comparative Medicine, Washington University, St. Louis, MO, USA.
Liliana LosadaJ. Craig Venter Institute, Rockville, MD, USA.
Eric T HarvillDepartment of Veterinary and Biomedical Sciences, Pennsylvania State University, University Park, PA, USA.
J. Craig Venter Institute · USWashington University in St. Louis · USPennsylvania State University · USUniversity of Georgia · USLycoming College · USNanyang Technological University · SGNational Animal Disease Center · USSingapore Centre for Environmental Life Sciences Engineering · SG

Funding

Evolution of the Bordetellae from Commensals to PathogensR01GM083113 · NIGMS · PENNSYLVANIA STATE UNIVERSITY, THE · PI HARVILL, ERIC T · 2008 to 2011
$2.1M
The Microbiota Pathogen CompetitionR01GM113681 · NIGMS · UNIVERSITY OF GEORGIA · PI HARVILL, ERIC T · 2015 to 2018
$1.3M
In vivo vaccine-driven evolution in Bordetella pertussisR21AI116186 · NIAID · UNIVERSITY OF GEORGIA · PI HARVILL, ERIC T · 2015 to 2016
$411k
Bordetella sp. Versus MicrobiotaR56AI107016 · NIAID · PENNSYLVANIA STATE UNIVERSITY, THE · PI HARVILL, ERIC T · 2014 to 2014
$377k
NIAID NIH HHS HHSN272200900007CNIAID NIH HHS R21 AI116186NIAID NIH HHS R56 AI107016NIGMS NIH HHS R01 GM083113NIGMS NIH HHS R01 GM113681
6 · The paper itself

Abstract

Bordetella hinzii is known to cause respiratory disease in poultry and has been associated with a variety of infections in immunocompromised humans. In addition, there are several reports of B. hinzii infections in laboratory-raised mice. Here we sequenced and analysed the complete genome sequences of multiple B. hinzii-like isolates, obtained from vendor-supplied C57BL/6 mice in animal research facilities on different continents, and we determined their taxonomic relationship to other Bordetella species. The whole-genome based and 16S rRNA gene based phylogenies each identified two separate clades in B. hinzii, one was composed of strains isolated from poultry, humans and a rabbit whereas the other clade was restricted to isolates from mice. Distinctly different estimated DNA-DNA hybridization values, average nucleotide identity scores, gene content, metabolic profiles and host specificity all provide compelling evidence for delineation of the two species, B. hinzii - from poultry, humans and rabbit - and Bordetella pseudohinzii sp. nov. type strain 8-296-03T (=NRRL B-59942T=NCTC 13808T) that infect mice.

Indexed as

PhylogenyAnimalsBacterial Typing TechniquesBase CompositionBordetellaDNA, BacterialFatty AcidsHumansMiceMice, Inbred C57BLNucleic Acid HybridizationPoultryRabbitsRNA, Ribosomal, 16SSequence Analysis, DNADNA, BacterialFatty AcidsRNA, Ribosomal, 16S

Identifiers

PMID27707434
PMCPMC5244500
OpenAlexW2528028781

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.