Evidence map›Paper›PMID 27706223›Full record

ArticlePLoS pathogens2016

Comparative Proteomics Reveals Strain-Specific β-TrCP Degradation via Rotavirus NSP1 Hijacking a Host Cullin-3-Rbx1 Complex.

Siyuan Ding, Nancie Mooney, Bin Li, Marcus R Kelly, Ningguo Feng, Alexander V Loktev, Adrish Sen, John T Patton, Peter K Jackson, Harry B Greenberg

Open access · goldAbstract readComparative Study
In one paragraph

Article in PLoS pathogens, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 1 pooled it
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 1 synthesis or guideline pooled it, 73 citations in OpenAlex.

  1. Pooled it
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  5. Fatty acid 2-hydroxylase facilitates rotavirus uncoating and endosomal escape.Proceedings of the National Academy of Sciences of the United States of America · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Siyuan DingDepartment of Microbiology and Immunology, Stanford University School of Medicine, Stanford, California, United States of America.
Nancie MooneyDepartment of Microbiology and Immunology, Stanford University School of Medicine, Stanford, California, United States of America.
Bin LiDepartment of Medicine, Division of Gastroenterology and Hepatology, Stanford University School of Medicine, Stanford, California, United States of America.
Marcus R KellyDepartment of Microbiology and Immunology, Stanford University School of Medicine, Stanford, California, United States of America.
Ningguo FengDepartment of Microbiology and Immunology, Stanford University School of Medicine, Stanford, California, United States of America.
Alexander V LoktevDepartment of Microbiology and Immunology, Stanford University School of Medicine, Stanford, California, United States of America.
Adrish SenDepartment of Microbiology and Immunology, Stanford University School of Medicine, Stanford, California, United States of America.
John T PattonDepartment of Veterinary Medicine, University of Maryland, College Park, Maryland, United States of America.
Peter K JacksonDepartment of Microbiology and Immunology, Stanford University School of Medicine, Stanford, California, United States of America.
Harry B GreenbergDepartment of Microbiology and Immunology, Stanford University School of Medicine, Stanford, California, United States of America.
Stanford University · USVA Palo Alto Health Care System · USPalo Alto Veterans Institute for Research · USUniversity of Maryland, College Park · US

Funding

Stanford/UNC Biomimetic U19 Research CenterU19AI116484 · NIAID · STANFORD UNIVERSITY · PI KUO, CALVIN J · 2015 to 2025
$13.5M
VIRAL GASTROENTERITIS--BASIS OF PROTECTION AND VIRULENCER01AI021362 · NIAID · STANFORD UNIVERSITY · PI GREENBERG, HARRY BERNARD · 1989 to 2014
$5.4M
Mechanisms of Ciliary Signaling Controlling Obesity and Metabolic DiseaseR01GM121565 · NIGMS · STANFORD UNIVERSITY · PI JACKSON, PETER KENT · 2017 to 2025
$4.3M
Regulation of Rotavirus Replication, Virulence, and Host Range Restriction by the Innate Immune SystemR01AI125249 · NIAID · PALO ALTO VETERANS INSTIT FOR RESEARCH · PI GREENBERG, HARRY BERNARD · 2017 to 2021
$2.1M
Viral Gastroenteritis: Basis of Virulence and ProtectionR56AI021362 · NIAID · PALO ALTO VETERANS INSTIT FOR RESEARCH · PI GREENBERG, HARRY BERNARD · 2015 to 2015
$506k
Rotavirus: Studies of the Effectors and Mechanisms of Heterotypic Humoral Immunity in Human Intestinal Epithelial CellsI01BX000158 · VA · VETERANS ADMIN PALO ALTO HEALTH CARE SYS · PI GREENBERG, HARRY BERNARD · 2011 to 2022
–
BLRD VA I01 BX000158NIAID NIH HHS R01 AI021362NIAID NIH HHS R01 AI125249NIAID NIH HHS R56 AI021362NIAID NIH HHS U19 AI116484NIGMS NIH HHS R01 GM121565
6 · The paper itself

Abstract

Rotaviruses (RVs) are the leading cause of severe gastroenteritis in young children, accounting for half a million deaths annually worldwide. RV encodes non-structural protein 1 (NSP1), a well-characterized interferon (IFN) antagonist, which facilitates virus replication by mediating the degradation of host antiviral factors including IRF3 and β-TrCP. Here, we utilized six human and animal RV NSP1s as baits and performed tandem-affinity purification coupled with high-resolution mass spectrometry to comprehensively characterize NSP1-host protein interaction network. Multiple Cullin-RING ubiquitin ligase (CRL) complexes were identified. Importantly, inhibition of cullin-3 (Cul3) or RING-box protein 1 (Rbx1), by siRNA silencing or chemical perturbation, significantly impairs strain-specific NSP1-mediated β-TrCP degradation. Mechanistically, we demonstrate that NSP1 localizes to the Golgi with the host Cul3-Rbx1 CRL complex, which targets β-TrCP and NSP1 for co-destruction at the proteasome. Our study uncovers a novel mechanism that RV employs to promote β-TrCP turnover and provides molecular insights into virus-mediated innate immunity inhibition.

Indexed as

Animalsbeta-Transducin Repeat-Containing ProteinsBlotting, WesternCarrier ProteinsCullin ProteinsFlow CytometryFluorescent Antibody TechniqueHEK293 CellsHost-Parasite InteractionsHumansImmunoprecipitationMass SpectrometryProteomicsReal-Time Polymerase Chain ReactionRotavirus InfectionsTransfectionbeta-Transducin Repeat-Containing ProteinsCarrier ProteinsCUL3 protein, humanCullin Proteinsnsp1 protein, RotavirusRBX1 protein, humanViral Nonstructural Proteins

Identifiers

PMID27706223
PMCPMC5051689
OpenAlexW2528348911

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.