Evidence map›Paper›PMID 27706106›Full record

ArticleInternational journal of molecular sciences2016

Genome-Wide Identification, Characterization and Expression Analysis of the Solute Carrier 6 Gene Family in Silkworm (Bombyx mori).

Xin Tang, Huawei Liu, Quanmei Chen, Xin Wang, Ying Xiong, Ping Zhao

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 7 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Xin TangState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing 400715, China. 13098784616@163.com.
Huawei LiuState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing 400715, China. lhw888718@163.com.
Quanmei ChenDepartment of Biochemistry and Molecular Biology, Chongqing Medical University, Chongqing 400016, China. eidoloncqm@126.com.
Xin WangState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing 400715, China. wangxin1-4@163.com.
Ying XiongState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing 400715, China. xiongy0823@126.com.
Ping ZhaoState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing 400715, China. zhaop@swu.edu.cn.
Southwest University · CNChongqing Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The solute carrier 6 (SLC6) gene family, initially known as the neurotransmitter transporters, plays vital roles in the regulation of neurotransmitter signaling, nutrient absorption and motor behavior. In this study, a total of 16 candidate genes were identified as SLC6 family gene homologs in the silkworm (Bombyx mori) genome. Spatio-temporal expression patterns of silkworm SLC6 gene transcripts indicated that these genes were highly and specifically expressed in midgut, brain and gonads; moreover, these genes were expressed primarily at the feeding stage or adult stage. Levels of expression for most midgut-specific and midgut-enriched gene transcripts were down-regulated after starvation but up-regulated after re-feeding. In addition, we observed that expression levels of these genes except for BmSLC6-15 and BmGT1 were markedly up-regulated by a juvenile hormone analog. Moreover, brain-enriched genes showed differential expression patterns during wandering and mating processes, suggesting that these genes may be involved in modulating wandering and mating behaviors. Our results improve our understanding of the expression patterns and potential physiological functions of the SLC6 gene family, and provide valuable information for the comprehensive functional analysis of the SLC6 gene family.

Indexed as

Gene Expression RegulationAmino Acid SequenceAnimalsBombyxBrainGenome, InsectInsect ProteinsPhylogenyPlasma Membrane Neurotransmitter Transport ProteinsSequence AlignmentSexual Behavior, AnimalTranscriptomeInsect ProteinsPlasma Membrane Neurotransmitter Transport ProteinsBombyx moriexpression patternmotor behaviornutrient absorptionthe solute carrier 6 (SLC6) gene

Identifiers

PMID27706106
PMCPMC5085708
OpenAlexW2528133707

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.