Evidence map›Paper›PMID 27705760›Full record

ArticleBiophysical journal2016

Imaging the Nonlinear Susceptibility Tensor of Collagen by Nonlinear Optical Stokes Ellipsometry.

Ximeng Y Dow, Emma L DeWalt, Shane Z Sullivan, Paul D Schmitt, James R W Ulcickas, Garth J Simpson

Abstract read
In one paragraph

Article in Biophysical journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ximeng Y DowDepartment of Chemistry, Purdue University, West Lafayette, Indiana.
Emma L DeWaltDepartment of Chemistry, Purdue University, West Lafayette, Indiana.
Shane Z SullivanDepartment of Chemistry, Purdue University, West Lafayette, Indiana.
Paul D SchmittDepartment of Chemistry, Purdue University, West Lafayette, Indiana.
James R W UlcickasDepartment of Chemistry, Purdue University, West Lafayette, Indiana.
Garth J SimpsonDepartment of Chemistry, Purdue University, West Lafayette, Indiana. Electronic address: gsimpson@purdue.edu.

Funding

Nonlinear Optical Imaging for Guiding Protein Structure DeterminationR01GM103401 · NIGMS · PURDUE UNIVERSITY · PI SIMPSON, GARTH JASON · 2012 to 2018
$1.7M
Ultrafast Nonlinear Optical Approaches toward High-Throughput Membrane Protein NaR01GM103910 · NIGMS · PURDUE UNIVERSITY · PI SIMPSON, GARTH JASON · 2013 to 2016
$1.1M
NIGMS NIH HHS R01 GM103401NIGMS NIH HHS R01 GM103910
6 · The paper itself

Abstract

Nonlinear optical Stokes ellipsometric (NOSE) microscopy was demonstrated for the analysis of collagen-rich biological tissues. NOSE is based on polarization-dependent second harmonic generation imaging. NOSE was used to access the molecular-level distribution of collagen fibril orientation relative to the local fiber axis at every position within the field of view. Fibril tilt-angle distribution was investigated by combining the NOSE measurements with ab initio calculations of the predicted molecular nonlinear optical response of a single collagen triple helix. The results were compared with results obtained previously by scanning electron microscopy, nuclear magnetic resonance imaging, and electron tomography. These results were enabled by first measuring the laboratory-frame Jones nonlinear susceptibility tensor, then extending to the local-frame tensor through pixel-by-pixel corrections based on local orientation.

Indexed as

Microscopy, PolarizationOptical ImagingAlgorithmsAnimalsCollagenEarEquipment DesignMiceModels, ChemicalNonlinear DynamicsProtein Structure, SecondaryQuantum TheorySkinSwineTailCollagen

Identifiers

PMID27705760
PMCPMC5052452

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.