Evidence map›Paper›PMID 27704782›Full record

ArticleACS infectious diseases2017

Essential but Not Vulnerable: Indazole Sulfonamides Targeting Inosine Monophosphate Dehydrogenase as Potential Leads against Mycobacterium tuberculosis.

Yumi Park, Angela Pacitto, Tracy Bayliss, Laura A T Cleghorn, Zhe Wang, Travis Hartman, Kriti Arora, Thomas R Ioerger, Jim Sacchettini, Menico Rizzi and 45 more

Abstract read
In one paragraph

Article in ACS infectious diseases, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
6.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 91 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

55 authors at 13 institutions in 6 countries.

Yumi ParkTuberculosis Research Section, Laboratory of Clinical Infectious Diseases, National Institute of Allergy and Infectious Disease, National Institutes of Health , Bethesda, Maryland 20892-3206, United States.
Angela PacittoDepartment of Biochemistry, University of Cambridge , Cambridge CB2 1GA, United Kingdom.
Tracy BaylissDrug Discovery Unit, College of Life Sciences, James Black Centre, University of Dundee , Dundee DD1 5EH, United Kingdom.
Laura A T CleghornDrug Discovery Unit, College of Life Sciences, James Black Centre, University of Dundee , Dundee DD1 5EH, United Kingdom.
Zhe WangDivision of Infectious Diseases, Department of Medicine, Weill Cornell Medical College , New York, New York 10065, United States.
Travis HartmanDivision of Infectious Diseases, Department of Medicine, Weill Cornell Medical College , New York, New York 10065, United States.
Kriti AroraTuberculosis Research Section, Laboratory of Clinical Infectious Diseases, National Institute of Allergy and Infectious Disease, National Institutes of Health , Bethesda, Maryland 20892-3206, United States.
Thomas R IoergerDepartment of Computer Science and Engineering, Texas A&M University , College Station, Texas 77843, United States.
Jim SacchettiniDepartment of Biochemistry & Biophysics, Texas A&M University , College Station, Texas 77843, United States.
Menico RizziDipartimento di Scienze del Farmaco, University of Piemonte Orientale , Via Bovio 6, 28100 Novara, Italy.
Stefano DoniniDipartimento di Scienze del Farmaco, University of Piemonte Orientale , Via Bovio 6, 28100 Novara, Italy.
Tom L BlundellDepartment of Biochemistry, University of Cambridge , Cambridge CB2 1GA, United Kingdom.
David B AscherDepartment of Biochemistry, University of Cambridge , Cambridge CB2 1GA, United Kingdom.
Kyu RheeDivision of Infectious Diseases, Department of Medicine, Weill Cornell Medical College , New York, New York 10065, United States.
Ardala BredaDepartment of Biochemistry & Biophysics, Texas A&M University , College Station, Texas 77843, United States.
Nian ZhouDepartment of Biochemistry & Biophysics, Texas A&M University , College Station, Texas 77843, United States.
Veronique DartoisPublic Health Research Institute, New Jersey Medical School, Rutgers, The State University of New Jersey , Newark, New Jersey 07103, United States.
Surendranadha Reddy JonnalaTuberculosis Research Section, Laboratory of Clinical Infectious Diseases, National Institute of Allergy and Infectious Disease, National Institutes of Health , Bethesda, Maryland 20892-3206, United States.
Laura E ViaTuberculosis Research Section, Laboratory of Clinical Infectious Diseases, National Institute of Allergy and Infectious Disease, National Institutes of Health , Bethesda, Maryland 20892-3206, United States.
Valerie MizrahiMRC/NHLS/UCT Molecular Mycobacteriology Research Unit, Institute of Infectious Disease and Molecular Medicine, University of Cape Town , Rondebosch 7700, South Africa.
Ola EpemoluDrug Discovery Unit, College of Life Sciences, James Black Centre, University of Dundee , Dundee DD1 5EH, United Kingdom.
Laste StojanovskiDrug Discovery Unit, College of Life Sciences, James Black Centre, University of Dundee , Dundee DD1 5EH, United Kingdom.
Fred SimeonsDrug Discovery Unit, College of Life Sciences, James Black Centre, University of Dundee , Dundee DD1 5EH, United Kingdom.
Maria Osuna-CabelloDrug Discovery Unit, College of Life Sciences, James Black Centre, University of Dundee , Dundee DD1 5EH, United Kingdom.
Lucy EllisDrug Discovery Unit, College of Life Sciences, James Black Centre, University of Dundee , Dundee DD1 5EH, United Kingdom.
Claire J MacKenzieDrug Discovery Unit, College of Life Sciences, James Black Centre, University of Dundee , Dundee DD1 5EH, United Kingdom.
Alasdair R C SmithDrug Discovery Unit, College of Life Sciences, James Black Centre, University of Dundee , Dundee DD1 5EH, United Kingdom.
Susan H DavisDrug Discovery Unit, College of Life Sciences, James Black Centre, University of Dundee , Dundee DD1 5EH, United Kingdom.
Dinakaran MurugesanDrug Discovery Unit, College of Life Sciences, James Black Centre, University of Dundee , Dundee DD1 5EH, United Kingdom.
Kirsteen I BuchananDrug Discovery Unit, College of Life Sciences, James Black Centre, University of Dundee , Dundee DD1 5EH, United Kingdom.
Penelope A TurnerDrug Discovery Unit, College of Life Sciences, James Black Centre, University of Dundee , Dundee DD1 5EH, United Kingdom.
Margaret HuggettDrug Discovery Unit, College of Life Sciences, James Black Centre, University of Dundee , Dundee DD1 5EH, United Kingdom.
Fabio ZuccottoDrug Discovery Unit, College of Life Sciences, James Black Centre, University of Dundee , Dundee DD1 5EH, United Kingdom.
Maria Jose Rebollo-LopezDiseases of the Developing World, GlaxoSmithKline , Calle Severo Ochoa 2, 28760 Tres Cantos, Madrid, Spain.
Maria Jose Lafuente-MonasterioDiseases of the Developing World, GlaxoSmithKline , Calle Severo Ochoa 2, 28760 Tres Cantos, Madrid, Spain.
Olalla SanzDiseases of the Developing World, GlaxoSmithKline , Calle Severo Ochoa 2, 28760 Tres Cantos, Madrid, Spain.
Gracia Santos DiazDiseases of the Developing World, GlaxoSmithKline , Calle Severo Ochoa 2, 28760 Tres Cantos, Madrid, Spain.
Joël LelièvreDiseases of the Developing World, GlaxoSmithKline , Calle Severo Ochoa 2, 28760 Tres Cantos, Madrid, Spain.
Lluis BallellDiseases of the Developing World, GlaxoSmithKline , Calle Severo Ochoa 2, 28760 Tres Cantos, Madrid, Spain.
Carolyn SelenskiGlaxoSmithKline , 5 Crescent Drive, Philadelphia, Pennsylvania 19112, United States.
Matthew AxtmanGlaxoSmithKline , 5 Crescent Drive, Philadelphia, Pennsylvania 19112, United States.
Sonja Ghidelli-DisseCellzome GmbH, Molecular Discovery Research, GlaxoSmithKline , Meyerhofstrasse 1, 69117 Heidelberg, Germany.
Hannah PflaumerCellzome GmbH, Molecular Discovery Research, GlaxoSmithKline , Meyerhofstrasse 1, 69117 Heidelberg, Germany.
Markus BöscheCellzome GmbH, Molecular Discovery Research, GlaxoSmithKline , Meyerhofstrasse 1, 69117 Heidelberg, Germany.
Gerard DrewesCellzome GmbH, Molecular Discovery Research, GlaxoSmithKline , Meyerhofstrasse 1, 69117 Heidelberg, Germany.
Gail M FreibergAbbVie Molecular Characterization , 1 North Waukegan Road, North Chicago, Illinois 60064, United States.
Matthew D KurnickAbbVie Molecular Characterization , 1 North Waukegan Road, North Chicago, Illinois 60064, United States.
Myron SrikumaranAbbVie Molecular Characterization , 1 North Waukegan Road, North Chicago, Illinois 60064, United States.
Dale J KempfAbbVie Molecular Characterization , 1 North Waukegan Road, North Chicago, Illinois 60064, United States.
Simon R GreenDrug Discovery Unit, College of Life Sciences, James Black Centre, University of Dundee , Dundee DD1 5EH, United Kingdom.
Peter C RayDrug Discovery Unit, College of Life Sciences, James Black Centre, University of Dundee , Dundee DD1 5EH, United Kingdom.
Kevin ReadDrug Discovery Unit, College of Life Sciences, James Black Centre, University of Dundee , Dundee DD1 5EH, United Kingdom.
Paul WyattDrug Discovery Unit, College of Life Sciences, James Black Centre, University of Dundee , Dundee DD1 5EH, United Kingdom.
Clifton E BarryTuberculosis Research Section, Laboratory of Clinical Infectious Diseases, National Institute of Allergy and Infectious Disease, National Institutes of Health , Bethesda, Maryland 20892-3206, United States.
Helena I BoshoffTuberculosis Research Section, Laboratory of Clinical Infectious Diseases, National Institute of Allergy and Infectious Disease, National Institutes of Health , Bethesda, Maryland 20892-3206, United States.
University of Dundee · GBGlaxoSmithKline (Spain) · ESNational Institute of Allergy and Infectious Diseases · USAbbVie (United States) · USGlaxoSmithKline (Germany) · DETexas A&M University · USCornell University · USUniversity of Cambridge · GBGlaxoSmithKline (United States) · USUniversità degli Studi del Piemonte Orientale “Amedeo Avogadro” · ITNational Institutes of Health · USRutgers, The State University of New Jersey · USUniversity of Cape Town · ZA

Funding

Development Of New Chemotherapeutics For TuberculosisZIAAI000693 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI BARRY, CLIFTON · 2009 to 2025
$20.1M
Experimental Animal Models of TB: Chemotherapeutics and ImagingZIAAI000734 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI BARRY, CLIFTON · 2009 to 2025
$19.6M
Intramural NIH HHS Z99 AI999999Medical Research Council MR/M026302/1Wellcome Trust
6 · The paper itself

Abstract

A potent, noncytotoxic indazole sulfonamide was identified by high-throughput screening of >100,000 synthetic compounds for activity against Mycobacterium tuberculosis (Mtb). This noncytotoxic compound did not directly inhibit cell wall biogenesis but triggered a slow lysis of Mtb cells as measured by release of intracellular green fluorescent protein (GFP). Isolation of resistant mutants followed by whole-genome sequencing showed an unusual gene amplification of a 40 gene region spanning from Rv3371 to Rv3411c and in one case a potential promoter mutation upstream of guaB2 (Rv3411c) encoding inosine monophosphate dehydrogenase (IMPDH). Subsequent biochemical validation confirmed direct inhibition of IMPDH by an uncompetitive mode of inhibition, and growth inhibition could be rescued by supplementation with guanine, a bypass mechanism for the IMPDH pathway. Beads containing immobilized indazole sulfonamides specifically interacted with IMPDH in cell lysates. X-ray crystallography of the IMPDH-IMP-inhibitor complex revealed that the primary interactions of these compounds with IMPDH were direct pi-pi interactions with the IMP substrate. Advanced lead compounds in this series with acceptable pharmacokinetic properties failed to show efficacy in acute or chronic murine models of tuberculosis (TB). Time-kill experiments in vitro suggest that sustained exposure to drug concentrations above the minimum inhibitory concentration (MIC) for 24 h were required for a cidal effect, levels that have been difficult to achieve in vivo. Direct measurement of guanine levels in resected lung tissue from tuberculosis-infected animals and patients revealed 0.5-2 mM concentrations in caseum and normal lung tissue. The high lesional levels of guanine and the slow lytic, growth-rate-dependent effect of IMPDH inhibition pose challenges to developing drugs against this target for use in treating TB.

Indexed as

AnimalsAntitubercular AgentsDrug DesignDrug DiscoveryDrug Resistance, BacterialGene Expression Regulation, BacterialGene Expression Regulation, EnzymologicHumansIMP DehydrogenaseMiceMice, Inbred C57BLMolecular StructureMutationMycobacterium tuberculosisProtein ConformationRabbitsAntitubercular AgentsIMP DehydrogenaseSulfonamidesguanineIMPDHindazole sulfonamideMycobacterium tuberculosispurine salvagetarget validation

Identifiers

PMID27704782
PMCPMC5972394
OpenAlexW2528123476

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.