Evidence map›Paper›PMID 27703179›Full record

ArticleScientific reports2016

Mining gut microbiome oligopeptides by functional metaproteome display.

Jonas Zantow, Sarah Just, Ilias Lagkouvardos, Sigrid Kisling, Stefan Dübel, Patricia Lepage, Thomas Clavel, Michael Hust

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Mapping Epitopes by Phage Display.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  4. Biomarker Discovery by ORFeome Phage Display.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Jonas ZantowTechnische Universität Braunschweig, Institute of Biochemistry, Biotechnology and Bioinformatics - Department for Biotechnology, Germany.
Sarah JustTechnische Universität München, ZIEL Institute for Food and Health, Freising, Germany.
Ilias LagkouvardosTechnische Universität München, ZIEL Institute for Food and Health, Freising, Germany.
Sigrid KislingTechnische Universität München, ZIEL Institute for Food and Health, Freising, Germany.
Stefan DübelTechnische Universität Braunschweig, Institute of Biochemistry, Biotechnology and Bioinformatics - Department for Biotechnology, Germany.
Patricia LepageMicalis Institute, INRA, AgroParisTech, Université Paris-Saclay, Jouy-en-Josas, France.
Thomas ClavelTechnische Universität München, ZIEL Institute for Food and Health, Freising, Germany.
Michael HustTechnische Universität Braunschweig, Institute of Biochemistry, Biotechnology and Bioinformatics - Department for Biotechnology, Germany.
Leibniz-Institute for Food Systems Biology at the Technical University of Munich · DETechnische Universität Braunschweig · DEAgroParisTech · FRTechnical University of Munich · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pathogen infections, autoimmune diseases, and chronic inflammatory disorders are associated with systemic antibody responses from the host immune system. Disease-specific antibodies can be important serum biomarkers, but the identification of antigens associated with specific immune reactions is challenging, in particular if complex communities of microorganisms are involved in the disease progression. Despite promising new diagnostic opportunities, the discovery of these serological markers becomes more difficult with increasing complexity of microbial communities. In the present work, we used a metagenomic M13 phage display approach to select immunogenic oligopeptides from the gut microbiome of transgenic mice suffering from chronic ileitis. We constructed three individual metaproteome phage display libraries with a library size of approximately 10

Indexed as

Gastrointestinal MicrobiomeIleitisMetagenomePeptide LibraryAnimalsChronic DiseaseMiceMice, TransgenicOligopeptidesProteomeOligopeptidesPeptide LibraryProteome

Identifiers

PMID27703179
PMCPMC5050496
OpenAlexW2558581816

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.