Evidence map›Paper›PMID 27700984›Full record

ArticleeLife2016

An electrostatic selection mechanism controls sequential kinase signaling downstream of the T cell receptor.

Neel H Shah, Qi Wang, Qingrong Yan, Deepti Karandur, Theresa A Kadlecek, Ian R Fallahee, William P Russ, Rama Ranganathan, Arthur Weiss, John Kuriyan

Open access · goldAbstract read
In one paragraph

Article in eLife, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
8.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 101 citations in OpenAlex.

  1. LAT condensation gates PLCγ1 activation via bimodal LAT phosphorylation.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Parallel reactions on a single T cell receptor offer a robust kinetic proofreading mechanism.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  8. Proofreading and single-molecule sensitivity in T cell receptor signaling by condensate nucleation.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Neel H ShahDepartment of Molecular and Cell Biology, University of California, Berkeley, United States.
Qi WangDepartment of Molecular and Cell Biology, University of California, Berkeley, United States.
Qingrong YanDepartment of Molecular and Cell Biology, University of California, Berkeley, United States.
Deepti KarandurDepartment of Molecular and Cell Biology, University of California, Berkeley, United States.
Theresa A KadlecekRosalind Russell/Ephraim P Engleman Rheumatology Research Center, Department of Medicine, University of California, San Francisco, United States.
Ian R FallaheeDepartment of Molecular and Cell Biology, University of California, Berkeley, United States.
William P RussGreen Center for Systems Biology, University of Texas Southwestern Medical Center, Dallas, United States.
Rama RanganathanGreen Center for Systems Biology, University of Texas Southwestern Medical Center, Dallas, United States.
Arthur WeissRosalind Russell/Ephraim P Engleman Rheumatology Research Center, Department of Medicine, University of California, San Francisco, United States.ORCID 0000-0002-2414-9024
John KuriyanDepartment of Molecular and Cell Biology, University of California, Berkeley, United States.ORCID 0000-0002-4414-5477
QB3 · USCenter for Systems Biology · USHoward Hughes Medical Institute · US

Funding

Understand the metabolic fitness of naïve T cellsP01AI091580 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ARTHUR WEISS · 2011 to 2026
$31.1M
NIAID NIH HHS P01 AI091580
6 · The paper itself

Abstract

The sequence of events that initiates T cell signaling is dictated by the specificities and order of activation of the tyrosine kinases that signal downstream of the T cell receptor. Using a platform that combines exhaustive point-mutagenesis of peptide substrates, bacterial surface-display, cell sorting, and deep sequencing, we have defined the specificities of the first two kinases in this pathway, Lck and ZAP-70, for the T cell receptor ζ chain and the scaffold proteins LAT and SLP-76. We find that ZAP-70 selects its substrates by utilizing an electrostatic mechanism that excludes substrates with positively-charged residues and favors LAT and SLP-76 phosphosites that are surrounded by negatively-charged residues. This mechanism prevents ZAP-70 from phosphorylating its own activation loop, thereby enforcing its strict dependence on Lck for activation. The sequence features in ZAP-70, LAT, and SLP-76 that underlie electrostatic selectivity likely contribute to the specific response of T cells to foreign antigens.

Indexed as

Signal TransductionStatic ElectricityHEK293 CellsHumansLymphocyte Specific Protein Tyrosine Kinase p56(lck)Receptors, Antigen, T-CellSubstrate SpecificityZAP-70 Protein-Tyrosine KinaseLymphocyte Specific Protein Tyrosine Kinase p56(lck)Receptors, Antigen, T-CellZAP-70 Protein-Tyrosine Kinasebacterial surface displaybiophysicsE. coliimmunologyLATLckstructural biologyT cell receptortyrosine kinaseZAP-70

Identifiers

PMID27700984
PMCPMC5089863
OpenAlexW2528354270

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.