Evidence map›Paper›PMID 27699821›Full record

ReviewBioEssays : news and reviews in molecular, cellular and developmental biology2016

Dissecting the effects of antibiotics on horizontal gene transfer: Analysis suggests a critical role of selection dynamics.

Allison J Lopatkin, Tatyana A Sysoeva, Lingchong You

Open access · greenAbstract readReview
In one paragraph

Review in BioEssays : news and reviews in molecular, cellular and developmental biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed, 2 pooled it
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 2 syntheses or guidelines pooled it, 75 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Review
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  6. Article
  7. Review
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  9. Article
  10. The metabolic burden associated with plasmid acquisition: An assessment of the unrecognized benefits to host cells.BioEssays : news and reviews in molecular, cellular and developmental biology · 2025
    Review
  11. Article
  12. Effect of Meropenem on Conjugative Plasmid Transfer inInternational journal of molecular sciences · 2024
    Article
  13. Characterization of antibiotic resistance development ofbioRxiv : the preprint server for biology · 2024
    Article
  14. Article
  15. Article
  16. Antibiotic perturbations to the gut microbiome.Nature reviews. Microbiology · 2023
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Allison J LopatkinDepartment of Biomedical Engineering, Duke University, Durham, NC, USA.
Tatyana A SysoevaDepartment of Biomedical Engineering, Duke University, Durham, NC, USA.
Lingchong YouDepartment of Biomedical Engineering, Duke University, Durham, NC, USA.
Duke University · US

Funding

Post-antibiotic effect and design of optimal antibiotic dosing protocolsR01GM098642 · NIGMS · DUKE UNIVERSITY · PI YOU, LINGCHONG · 2011 to 2025
$3.6M
A synthetic biology approach to analyze evolution of programmed bacterial deathR01GM110494 · NIGMS · DUKE UNIVERSITY · PI YOU, LINGCHONG · 2014 to 2017
$1.2M
NIGMS NIH HHS R01 GM098642NIGMS NIH HHS R01 GM110494
6 · The paper itself

Abstract

Horizontal gene transfer (HGT) is a major mechanism responsible for the spread of antibiotic resistance. Conversely, it is often assumed that antibiotics promote HGT. Careful dissection of the literature, however, suggests a lack of conclusive evidence supporting this notion in general. This is largely due to the lack of well-defined quantitative experiments to address this question in an unambiguous manner. In this review, we discuss the extent to which HGT is responsible for the spread of antibiotic resistance and examine what is known about the effect of antibiotics on the HGT dynamics. We focus on conjugation, which is the dominant mode of HGT responsible for spreading antibiotic resistance on the global scale. Our analysis reveals a need to design experiments to quantify HGT in such a way to facilitate rigorous data interpretation. Such measurements are critical for developing novel strategies to combat resistance spread through HGT.

Indexed as

Gene Transfer, HorizontalBacteriaDrug Resistance, Bacterialantibiotic resistance spreadhorizontal gene transfer

Identifiers

PMID27699821
PMCPMC6541220
OpenAlexW2528680074

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.