Evidence map›Paper›PMID 27698253›Full record

ArticlePlant physiology2016

A Legume TOR Protein Kinase Regulates Rhizobium Symbiosis and Is Essential for Infection and Nodule Development.

Kalpana Nanjareddy, Lourdes Blanco, Manoj-Kumar Arthikala, Xóchitl Alvarado-Affantranger, Carmen Quinto, Federico Sánchez, Miguel Lara

Open access · greenAbstract read
In one paragraph

Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
8.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 38 citations in OpenAlex.

  1. Plant signaling & behavior · 2025
    Article
  2. Review
  3. Autophagy and Bacterial infections.Autophagy reports · 2025
    Review
  4. Autophagy and Symbiosis: Membranes, ER, and Speculations.International journal of molecular sciences · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Auxin and Target of Rapamycin Spatiotemporally Regulate Root Organogenesis.International journal of molecular sciences · 2021
    Review
  9. Article
  10. A Tour of TOR Complex Signaling in Plants.Trends in biochemical sciences · 2021
    Review
  11. The Importance of TOR Kinase in Plant Development.Frontiers in plant science · 2020
    Review
  12. Review
  13. Review
  14. Plant physiology · 2018
    Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Kalpana NanjareddyCiencias Agrogenómicas, Escuela Nacional de Estudios Superiores Unidad León-Universidad Nacional Autónoma de México, Ciudad de Mexico C.P. 37684, Mexico (K.N., M.-K.A.).ORCID 0000-0002-7052-4120
Lourdes BlancoCiencias Agrogenómicas, Escuela Nacional de Estudios Superiores Unidad León-Universidad Nacional Autónoma de México, Ciudad de Mexico C.P. 37684, Mexico (K.N., M.-K.A.).
Manoj-Kumar ArthikalaCiencias Agrogenómicas, Escuela Nacional de Estudios Superiores Unidad León-Universidad Nacional Autónoma de México, Ciudad de Mexico C.P. 37684, Mexico (K.N., M.-K.A.).ORCID 0000-0002-4535-6524
Xóchitl Alvarado-AffantrangerCiencias Agrogenómicas, Escuela Nacional de Estudios Superiores Unidad León-Universidad Nacional Autónoma de México, Ciudad de Mexico C.P. 37684, Mexico (K.N., M.-K.A.).ORCID 0000-0002-3068-2036
Carmen QuintoCiencias Agrogenómicas, Escuela Nacional de Estudios Superiores Unidad León-Universidad Nacional Autónoma de México, Ciudad de Mexico C.P. 37684, Mexico (K.N., M.-K.A.).
Federico SánchezCiencias Agrogenómicas, Escuela Nacional de Estudios Superiores Unidad León-Universidad Nacional Autónoma de México, Ciudad de Mexico C.P. 37684, Mexico (K.N., M.-K.A.).ORCID 0000-0002-2961-4896
Miguel LaraCiencias Agrogenómicas, Escuela Nacional de Estudios Superiores Unidad León-Universidad Nacional Autónoma de México, Ciudad de Mexico C.P. 37684, Mexico (K.N., M.-K.A.); mlara@unam.mx.ORCID 0000-0002-5885-7950
Universidad Nacional Autónoma de México · MXUniversidad Autónoma de la Ciudad de México · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The target of rapamycin (TOR) protein kinase regulates metabolism, growth, and life span in yeast, animals, and plants in coordination with nutrient status and environmental conditions. The nutrient-dependent nature of TOR functionality makes this kinase a putative regulator of symbiotic associations involving nutrient acquisition. However, TOR's role in these processes remains to be understood. Here, we uncovered the role of TOR during the bean (Phaseolus vulgaris)-Rhizobium tropici (Rhizobium) symbiotic interaction. TOR was expressed in all tested bean tissues, with higher transcript levels in the root meristems and senesced nodules. We showed TOR promoter expression along the progressing infection thread and in the infected cells of mature nodules. Posttranscriptional gene silencing of TOR using RNA interference (RNAi) showed that this gene is involved in lateral root elongation and root cell organization and also alters the density, size, and number of root hairs. The suppression of TOR transcripts also affected infection thread progression and associated cortical cell divisions, resulting in a drastic reduction of nodule numbers. TOR-RNAi resulted in reduced reactive oxygen species accumulation and altered CyclinD1 and CyclinD3 expression, which are crucial factors for infection thread progression and nodule organogenesis. Enhanced expression of TOR-regulated ATG genes in TOR-RNAi roots suggested that TOR plays a role in the recognition of Rhizobium as a symbiont. Together, these data suggest that TOR plays a vital role in the establishment of root nodule symbiosis in the common bean.

Indexed as

Amino Acid SequenceAutophagyCell WallDown-RegulationGene Expression ProfilingGene Expression Regulation, PlantGenes, PlantPhagosomesPhaseolusPhenotypePhylogenyPlant ProteinsPlant Root NodulationPlants, Genetically ModifiedPromoter Regions, GeneticReactive Oxygen SpeciesPlant ProteinsReactive Oxygen SpeciesTOR Serine-Threonine Kinases

Identifiers

PMID27698253
PMCPMC5100775
OpenAlexW2546915245

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.