Evidence map›Paper›PMID 27698086›Full record

ArticleJournal of bacteriology2016

Identification of Functions Affecting Predator-Prey Interactions between Myxococcus xanthus and Bacillus subtilis.

Susanne Müller, Sarah N Strack, Sarah E Ryan, Mary Shawgo, Abigail Walling, Susanna Harris, Chris Chambers, Jennifer Boddicker, John R Kirby

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.1field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. Article
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  4. Article
  5. Article
  6. Frontiers in microbiology · 2024
    Review
  7. Interactions of DifferentInternational journal of molecular sciences · 2023
    Article
  8. Review
  9. Tubulysins are Essential for the Preying of Ciliates by Myxobacteria.Journal of microbiology (Seoul, Korea) · 2023
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Comparative genomics ofFrontiers in microbiology · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Susanne MüllerDepartment of Microbiology, University of Iowa, Iowa City, Iowa, USA.
Sarah N StrackCollege of Public Health, University of Iowa, Iowa City, Iowa, USA.
Sarah E RyanCarver College of Medicine, University of Iowa, Iowa City, Iowa, USA.
Mary ShawgoMath and Science Division, Graceland University, Lamoni, Iowa, USA.
Abigail WallingCarleton College, Northfield, Minnesota, USA.
Susanna HarrisBiology Department, University of North Carolina, Durham, North Carolina, USA.
Chris ChambersMath and Science Division, Graceland University, Lamoni, Iowa, USA.
Jennifer BoddickerDepartment of Microbiology, University of Iowa, Iowa City, Iowa, USA.
John R KirbyDepartment of Microbiology, University of Iowa, Iowa City, Iowa, USA john-kirby@uiowa.edu.
University of Iowa · USGraceland University · USCarleton College · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Soil bacteria engage each other in competitive and cooperative ways to determine their microenvironments. In this study, we report the identification of a large number of genes required for Myxococcus xanthus to engage Bacillus subtilis in a predator-prey relationship. We generated and tested over 6,000 individual transposon insertion mutants of M. xanthus and found many new factors required to promote efficient predation, including the specialized metabolite myxoprincomide, an ATP-binding cassette (ABC) transporter permease, and a clustered regularly interspaced short palindromic repeat (CRISPR) locus encoding bacterial immunity. We also identified genes known to be involved in predation, including those required for the production of exopolysaccharides and type IV pilus (T4P)-dependent motility, as well as chemosensory and two-component systems. Furthermore, deletion of these genes confirmed their role during predation. Overall, M. xanthus predation appears to be a multifactorial process, with multiple determinants enhancing predation capacity. IMPORTANCE: Soil bacteria engage each other in complex environments and utilize multiple traits to ensure survival. Here, we report the identification of multiple traits that enable a common soil organism, Myxococcus xanthus, to prey upon and utilize nutrients from another common soil organism, Bacillus subtilis We mutagenized the predator and carried out a screen to identify genes that were required to either enhance or diminish capacity to consume prey. We identified dozens of genes encoding factors that contribute to the overall repertoire for the predator to successfully engage its prey in the natural environment.

Indexed as

Bacillus subtilisBacterial ProteinsClustered Regularly Interspaced Short Palindromic RepeatsGene Expression Regulation, BacterialMutagenesis, InsertionalMyxococcus xanthusBacterial Proteins

Identifiers

PMID27698086
PMCPMC5116937
OpenAlexW2529785300

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.