Evidence map›Paper›PMID 27696002›Full record

ArticleJournal of computational neuroscience2016

Modelling zinc changes at the hippocampal mossy fiber synaptic cleft.

M E Quinta-Ferreira, F D S Sampaio Dos Aidos, C M Matias, P J Mendes, J C Dionísio, R M Santos, L M Rosário, R M Quinta-Ferreira

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of computational neuroscience, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.3field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. CaChannels (Austin, Tex.) · 2020
    Review
  5. Review
  6. Article
  7. Intracellular ZnScientific reports · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

M E Quinta-FerreiraCNC- Center for Neuroscience and Cell Biology, University of Coimbra, P-3004-504, Coimbra, Portugal. emilia@uc.pt.
F D S Sampaio Dos AidosCNC- Center for Neuroscience and Cell Biology, University of Coimbra, P-3004-504, Coimbra, Portugal.
C M MatiasCNC- Center for Neuroscience and Cell Biology, University of Coimbra, P-3004-504, Coimbra, Portugal.
P J MendesDepartment of Physics, University of Coimbra, P-3004-516, Coimbra, Portugal.
J C DionísioCNC- Center for Neuroscience and Cell Biology, University of Coimbra, P-3004-504, Coimbra, Portugal.
R M SantosCNC- Center for Neuroscience and Cell Biology, University of Coimbra, P-3004-504, Coimbra, Portugal.
L M RosárioCNC- Center for Neuroscience and Cell Biology, University of Coimbra, P-3004-504, Coimbra, Portugal.
R M Quinta-FerreiraCIEPQPF - Research Centre of Chemical Process Engineering and Forest Products, Department of Chemical Engineering, University of Coimbra, P-3030-790, Coimbra, Portugal.
University of Coimbra · PTLIP - Laboratory of Instrumentation and Experimental Particle Physics · PTUniversity of Lisbon · PTUniversity of Trás-os-Montes and Alto Douro · PT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Zinc, a transition metal existing in very high concentrations in the hippocampal mossy fibers from CA3 area, is assumed to be co-released with glutamate and to have a neuromodulatory role at the corresponding synapses. The synaptic action of zinc is determined both by the spatiotemporal characteristics of the zinc release process and by the kinetics of zinc binding to sites located in the cleft area, as well as by their concentrations. This work addresses total, free and complexed zinc concentration changes, in an individual synaptic cleft, following single, short and long periods of evoked zinc release. The results estimate the magnitude and time course of the concentrations of zinc complexes, assuming that the dynamics of the release processes are similar to those of glutamate. It is also considered that, for the cleft zinc concentrations used in the model (≤ 1 μM), there is no postsynaptic zinc entry. For this reason, all released zinc ends up being reuptaken in a process that is several orders of magnitude slower than that of release and has thus a much smaller amplitude. The time derivative of the total zinc concentration in the cleft is represented by the difference between two alpha functions, corresponding to the released and uptaken components. These include specific parameters that were chosen assuming zinc and glutamate co-release, with similar time courses. The peak amplitudes of free zinc in the cleft were selected based on previously reported experimental cleft zinc concentration changes evoked by single and multiple stimulation protocols. The results suggest that following a low amount of zinc release, similar to that associated with one or a few stimuli, zinc clearance is mainly mediated by zinc binding to the high-affinity sites on the NMDA receptors and to the low-affinity sites on the highly abundant GLAST glutamate transporters. In the case of higher zinc release brought about by a larger group of stimuli, most zinc binding occurs essentially to the GLAST transporters, having the corresponding zinc complex a maximum concentration that is more than one order of magnitude larger than that for the high and low affinity NMDA sites. The other zinc complexes considered in the model, namely those formed with sites on the AMPA receptors, calcium and K

Indexed as

Models, NeurologicalAnimalsCalciumGlutamic AcidMossy Fibers, HippocampalReceptors, AMPAReceptors, N-Methyl-D-AspartateSynapsesTime FactorsZincCalciumGlutamic AcidReceptors, AMPAReceptors, N-Methyl-D-AspartateZincComputer simulations at CA3 areaGlutamate receptors and transportersZinc binding sites and complexesZinc clearance and uptake

Identifiers

PMID27696002
OpenAlexW2526883478

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.