ReviewTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2016
Genetic control of flowering time in rice: integration of Mendelian genetics and genomics.
Review in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 90 papers, 1 of them a synthesis that pooled it.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
90 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Meta-QTL and ortho-MQTL analyses identified genomic regions controlling rice yield, yield-related traits and root architecture under water deficit conditions.Scientific reports · 2021Pooled it
- An IRAT109 NAM population: Genetic characterization and mapping utility for trait dissection in japonica rice (Oryza sativa L.).The plant genome · 2026Article
- BloomSight: An ultra-high-frequency phenotyping framework for diurnal flowering dynamics inPlant phenomics (Washington, D.C.) · 2026Article
- Allele-informed QTL-seq identifies Hd18 as a minor modifier of heading date in elite rice cultivars.The plant genome · 2026Article
- Sodium Hydrosulfide (NaHS) Triggers Jasmonate and Reactive Oxygen Species to Boost Rice (Plants (Basel, Switzerland) · 2026Article
- QTL mapping for early heading of 'Haruka Nijo', the leading barley (Breeding science · 2026Article
- The current state of the use of DNA markers for improving the efficiency of rice breeding in Japan.Breeding science · 2026Article
- Adaptive response of cultivated rice (Oryza sativa ssp. indica) flowers to low sunlight intensity.Biologia futura · 2025Article
- Detection and validation of QTLs for flowering time in morning glory.Breeding science · 2025Article
- Applying gradient tree boosting to QTL mapping with Shapley additive explanations.Breeding science · 2025Article
- Detection of three novel loci involved in reduced seed-shattering behaviour of an aus rice cultivar, Oryza sativa Kasalath.Molecular genetics and genomics : MGG · 2025Article
- Genetic and environmental regulation of early heading in photoperiod-insensitive rice: impacts on heading synchrony, premature heading, and tiller development lag.Breeding science · 2025Article
- JMJ720 regulates flowering time in rice via H3K9 demethylation of Hd1.Plant biotechnology journal · 2025Article
- Modelling and Using Spatial Effects in Nationwide Historical Data Improve Genomic Prediction of Rice Heading Date in Japan.Rice (New York, N.Y.) · 2025Article
- A combination of upstream alleles involved in rice heading hastens natural long-day responses.Genes & genomics · 2025Article
- Overexpression of the general transcription factor OsTFIIB5 alters rice development and seed quality.Plant cell reports · 2025Article
- Sucrose induces flowering by degradation of the floral repressor Ghd7 via K48-linked polyubiquitination in rice.Journal of integrative plant biology · 2024Article
- How have breeders adapted rice flowering to the growing region?Journal of integrative plant biology · 2024Article
- Rice Promoter Editing: An Efficient Genetic Improvement Strategy.Rice (New York, N.Y.) · 2024Review
- Improving Rice Quality by Regulating the Heading Dates of Rice Varieties without Yield Penalties.Plants (Basel, Switzerland) · 2024Article
30 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
3 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
key messageIntegration of previous Mendelian genetic analyses and recent molecular genomics approaches, such as linkage mapping and QTL cloning, dramatically strengthened our current understanding of genetic control of rice flowering time. Flowering time is one of the most important agronomic traits for seed production in rice (Oryza sativa L.). It is controlled mainly by genes associated with photoperiod sensitivity, particularly in short-day plants such as rice. Since the early twentieth century, rice breeders and researchers have been interested in elucidating the genetic basis of flowering time because its modification is important for regional adaptation and yield optimization. Although flowering time is a complex trait controlled by many quantitative trait loci (QTLs), classical genetic studies have shown that many associated genes are inherited in accordance with Mendelian laws. Decoding the rice genome sequence opened a new era in understanding the genetic control of flowering time on the basis of genome-wide mapping and gene cloning. Heading date 1 (Hd1) was the first flowering time QTL to be isolated using natural variation in rice. Recent accumulation of information on rice genome has facilitated the cloning of other QTLs, including those with minor effects on flowering time. This information has allowed us to rediscover some of the flowering genes that were identified by classical Mendelian genetics. The genes characterized so far, including Hd1, have been assigned to specific photoperiod pathways. In this review, we provide an overview of the studies that led to an in-depth understanding of the genetic control of flowering time in rice, and of the current state of improving and fine-tuning this trait for rice breeding.
Indexed as
Identifiers
27695876What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.