Evidence map›Paper›PMID 27694308›Full record

ArticleNucleic acids research2016

Analyzing structure-function relationships of artificial and cancer-associated PARP1 variants by reconstituting TALEN-generated HeLa PARP1 knock-out cells.

Lisa Rank, Sebastian Veith, Eva C Gwosch, Janine Demgenski, Magdalena Ganz, Marjolijn C Jongmans, Christopher Vogel, Arthur Fischbach, Stefanie Buerger, Jan M F Fischer and 10 more

Abstract read
In one paragraph

Article in Nucleic acids research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. A Population-Specific PARP1 Gene Variation Modulates PARP Trapping.bioRxiv : the preprint server for biology · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Article
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  10. Article
  11. AKT-dependent nuclear localization of EPRS1 activates PARP1 in breast cancer cells.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  12. Article
  13. Article
  14. NADCells · 2023
    Article
  15. Article
  16. Mitochondrial PARP1 regulates NADExperimental & molecular medicine · 2022
    Article
  17. Fueling genome maintenance: On the versatile roles of NADThe Journal of biological chemistry · 2022
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Lisa RankMolecular Toxicology Group, Department of Biology, University of Konstanz, D-78457 Konstanz, Germany.
Sebastian VeithMolecular Toxicology Group, Department of Biology, University of Konstanz, D-78457 Konstanz, Germany.
Eva C GwoschBioimaging Center, Department of Biology, University of Konstanz, D-78457 Konstanz, Germany.
Janine DemgenskiMolecular Toxicology Group, Department of Biology, University of Konstanz, D-78457 Konstanz, Germany.
Magdalena GanzBioimaging Center, Department of Biology, University of Konstanz, D-78457 Konstanz, Germany.
Marjolijn C JongmansDepartment of Human Genetics, Radboud University Medical Center Nijmegen, Nijmegen Centre for Molecular Life Sciences, Nijmegen, The Netherlands.
Christopher VogelMolecular Toxicology Group, Department of Biology, University of Konstanz, D-78457 Konstanz, Germany.
Arthur FischbachMolecular Toxicology Group, Department of Biology, University of Konstanz, D-78457 Konstanz, Germany.
Stefanie BuergerFlowKon FACS Facility, Department of Biology, University of Konstanz, D-78457 Konstanz, Germany.
Jan M F FischerMolecular Toxicology Group, Department of Biology, University of Konstanz, D-78457 Konstanz, Germany.
Tabea ZubelMolecular Toxicology Group, Department of Biology, University of Konstanz, D-78457 Konstanz, Germany.
Anna StierMolecular Toxicology Group, Department of Biology, University of Konstanz, D-78457 Konstanz, Germany.
Christina RennerMolecular Toxicology Group, Department of Biology, University of Konstanz, D-78457 Konstanz, Germany.
Michael SchmalzCenter of Applied Photonics, Department of Physics, Department of Biology, University of Konstanz, D-78457 Konstanz, Germany.
Sascha BenekeMolecular Toxicology Group, Department of Biology, University of Konstanz, D-78457 Konstanz, Germany.
Marcus GroettrupFlowKon FACS Facility, Department of Biology, University of Konstanz, D-78457 Konstanz, Germany.
Roland P KuiperDepartment of Human Genetics, Radboud University Medical Center Nijmegen, Nijmegen Centre for Molecular Life Sciences, Nijmegen, The Netherlands.
Alexander BürkleMolecular Toxicology Group, Department of Biology, University of Konstanz, D-78457 Konstanz, Germany.
Elisa Ferrando-MayBioimaging Center, Department of Biology, University of Konstanz, D-78457 Konstanz, Germany.
Aswin MangerichMolecular Toxicology Group, Department of Biology, University of Konstanz, D-78457 Konstanz, Germany aswin.mangerich@uni-konstanz.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genotoxic stress activates PARP1, resulting in the post-translational modification of proteins with poly(ADP-ribose) (PAR). We genetically deleted PARP1 in one of the most widely used human cell systems, i.e. HeLa cells, via TALEN-mediated gene targeting. After comprehensive characterization of these cells during genotoxic stress, we analyzed structure-function relationships of PARP1 by reconstituting PARP1 KO cells with a series of PARP1 variants. Firstly, we verified that the PARP1\E988K mutant exhibits mono-ADP-ribosylation activity and we demonstrate that the PARP1\L713F mutant is constitutively active in cells. Secondly, both mutants exhibit distinct recruitment kinetics to sites of laser-induced DNA damage, which can potentially be attributed to non-covalent PARP1-PAR interaction via several PAR binding motifs. Thirdly, both mutants had distinct functional consequences in cellular patho-physiology, i.e. PARP1\L713F expression triggered apoptosis, whereas PARP1\E988K reconstitution caused a DNA-damage-induced G2 arrest. Importantly, both effects could be rescued by PARP inhibitor treatment, indicating distinct cellular consequences of constitutive PARylation and mono(ADP-ribosyl)ation. Finally, we demonstrate that the cancer-associated PARP1 SNP variant (V762A) as well as a newly identified inherited PARP1 mutation (F304L\V762A) present in a patient with pediatric colorectal carcinoma exhibit altered biochemical and cellular properties, thereby potentially supporting human carcinogenesis. Together, we establish a novel cellular model for PARylation research, by revealing strong structure-function relationships of natural and artificial PARP1 variants.

Indexed as

AnimalsCell LineDNA DamageGene Knockout TechniquesGene TargetingGenetic VariationHeLa CellsHumansNADPoly (ADP-Ribose) Polymerase-1Protein BindingProtein ConformationRecombinant ProteinsSequence DeletionStructure-Activity RelationshipTranscription Activator-Like Effector NucleasesNADPoly (ADP-Ribose) Polymerase-1Recombinant ProteinsTranscription Activator-Like Effector Nucleases

Identifiers

PMID27694308
PMCPMC5137445

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.