Evidence map›Paper›PMID 27693506›Full record

ArticleDevelopmental cell2016

TRIMs and Galectins Globally Cooperate and TRIM16 and Galectin-3 Co-direct Autophagy in Endomembrane Damage Homeostasis.

Santosh Chauhan, Suresh Kumar, Ashish Jain, Marisa Ponpuak, Michal H Mudd, Tomonori Kimura, Seong Won Choi, Ryan Peters, Michael Mandell, Jack-Ansgar Bruun and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Developmental cell, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 302 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
302citing papers in PubMed, 1 pooled it
22.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

302 citing papers in PubMed, 1 synthesis or guideline pooled it, 474 citations in OpenAlex.

  1. Stay in touch with the endoplasmic reticulum.Science China. Life sciences · 2024
    Pooled it
  2. Review
  3. Review
  4. Review
  5. Article
  6. Selective autophagy in kidney health and disease.Nature reviews. Nephrology · 2026
    Review
  7. Review
  8. Review
  9. Review
  10. Article
  11. Cross-Modal Denoising and Integration of Spatial Multi-Omics Data with CANDIES.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  12. Article
  13. Review
  14. Review
  15. Lysosomal homeostasis at the crossroads of neurodegeneration.The Journal of clinical investigation · 2026
    Review
  16. Article
  17. Review
  18. Review
  19. Article
  20. The Role of Galectin-3 in Liver Inflammation and Fibrosis.Journal of inflammation research · 2026
    Review

242 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 3 countries.

Santosh ChauhanDepartment of Molecular Genetics and Microbiology, University of New Mexico Health Sciences Center, 915 Camino de Salud, Northeast, Albuquerque, NM 87131, USA.
Suresh KumarDepartment of Molecular Genetics and Microbiology, University of New Mexico Health Sciences Center, 915 Camino de Salud, Northeast, Albuquerque, NM 87131, USA.
Ashish JainMolecular Cancer Research Group, Institute of Medical Biology, University of Tromsø - The Arctic University of Norway, 9037 Tromsø, Norway.
Marisa PonpuakDepartment of Molecular Genetics and Microbiology, University of New Mexico Health Sciences Center, 915 Camino de Salud, Northeast, Albuquerque, NM 87131, USA; Department of Microbiology, Faculty of Science, Mahidol University, 272 Rama VI, Rachathewi, Bangkok 10400, Thailand.
Michal H MuddDepartment of Molecular Genetics and Microbiology, University of New Mexico Health Sciences Center, 915 Camino de Salud, Northeast, Albuquerque, NM 87131, USA.
Tomonori KimuraDepartment of Molecular Genetics and Microbiology, University of New Mexico Health Sciences Center, 915 Camino de Salud, Northeast, Albuquerque, NM 87131, USA.
Seong Won ChoiDepartment of Molecular Genetics and Microbiology, University of New Mexico Health Sciences Center, 915 Camino de Salud, Northeast, Albuquerque, NM 87131, USA.
Ryan PetersDepartment of Molecular Genetics and Microbiology, University of New Mexico Health Sciences Center, 915 Camino de Salud, Northeast, Albuquerque, NM 87131, USA.
Michael MandellDepartment of Molecular Genetics and Microbiology, University of New Mexico Health Sciences Center, 915 Camino de Salud, Northeast, Albuquerque, NM 87131, USA.
Jack-Ansgar BruunMolecular Cancer Research Group, Institute of Medical Biology, University of Tromsø - The Arctic University of Norway, 9037 Tromsø, Norway.
Terje JohansenMolecular Cancer Research Group, Institute of Medical Biology, University of Tromsø - The Arctic University of Norway, 9037 Tromsø, Norway. Electronic address: terje.johansen@uit.no.
Vojo DereticDepartment of Molecular Genetics and Microbiology, University of New Mexico Health Sciences Center, 915 Camino de Salud, Northeast, Albuquerque, NM 87131, USA. Electronic address: vderetic@salud.unm.edu.
University of New Mexico · USUiT The Arctic University of Norway · NO

Funding

Autophagy Against Tuberculosis and HIVR01AI111935 · NIAID · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI DERETIC, VOJO P · 2014 to 2023
$7.0M
Pattern Recognition Receptors and Autophagy in Mtb Control in AIDSR01AI042999 · NIAID · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI DERETIC, VOJO P · 1998 to 2017
$6.6M
Pattern Recognition Receptors and Autophagy in Mtb Control in AIDSR37AI042999 · NIAID · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI VOJO P DERETIC · 2018 to 2026
$4.7M
Autophagy-based HDT for tuberculosisUH2AI122313 · NIAID · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI DERETIC, VOJO P, ELLNER, JERROLD J. · 2015 to 2016
$1.1M
NIAID NIH HHS R01 AI042999NIAID NIH HHS R01 AI111935NIAID NIH HHS R37 AI042999NIAID NIH HHS UH2 AI122313
6 · The paper itself

Abstract

Selective autophagy performs an array of tasks to maintain intracellular homeostasis, sterility, and organellar and cellular functionality. The fidelity of these processes depends on precise target recognition and limited activation of the autophagy apparatus in a localized fashion. Here we describe cooperation in such processes between the TRIM family and Galectin family of proteins. TRIMs, which are E3 ubiquitin ligases, displayed propensity to associate with Galectins. One specific TRIM, TRIM16, interacted with Galectin-3 in a ULK1-dependent manner. TRIM16, through integration of Galectin- and ubiquitin-based processes, coordinated recognition of membrane damage with mobilization of the core autophagy regulators ATG16L1, ULK1, and Beclin 1 in response to damaged endomembranes. TRIM16 affected mTOR, interacted with TFEB, and influenced TFEB's nuclear translocation. The cooperation between TRIM16 and Galectin-3 in targeting and activation of selective autophagy protects cells from lysosomal damage and Mycobacterium tuberculosis invasion.

Indexed as

AutophagyHomeostasisAnimalsAutophagy-Related Protein-1 HomologAutophagy-Related ProteinsBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsBeclin-1CalcineurinCytoprotectionDNA-Binding ProteinsGalectin 3HEK293 CellsHeLa CellsHumansIntracellular MembranesIntracellular Signaling Peptides and ProteinsATG16L1 protein, humanAutophagy-Related Protein-1 HomologAutophagy-Related ProteinsBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsBeclin-1BECN1 protein, humanCalcineurinDNA-Binding ProteinsGalectin 3Intracellular Signaling Peptides and ProteinsMAP1LC3B protein, humanMicrotubule-Associated ProteinsMultiprotein ComplexesTFEB protein, humanTOR Serine-Threonine KinasesTranscription FactorsTRIM16 protein, humanTripartite Motif ProteinsUbiquitinUbiquitin-Protein LigasesULK1 protein, human

Identifiers

PMID27693506
PMCPMC5104201
OpenAlexW2525950393

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.