Evidence map›Paper›PMID 27686861›Full record

ArticleScientific reports2016

A pre-metazoan origin of the CRK gene family and co-opted signaling network.

Yoko Shigeno-Nakazawa, Takuma Kasai, Sewon Ki, Elina Kostyanovskaya, Jana Pawlak, Junya Yamagishi, Noriaki Okimoto, Makoto Taiji, Mariko Okada, Jody Westbrook and 3 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Crk adaptor proteins are necessary for the development of the zebrafish retina.Developmental dynamics : an official publication of the American Association of Anatomists · 2022
    Article
  3. Bifunctional Role of CrkL during Bone Remodeling.International journal of molecular sciences · 2021
    Article
  4. Essential role of theLife science alliance · 2020
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

Yoko Shigeno-NakazawaThe Ben May Department for Cancer Research, The University of Chicago, USA.
Takuma KasaiRIKEN Quantitative Biology Center (QBiC), Yokohama, Kanagawa, Japan.
Sewon KiRIKEN Center for Integrative Medical Sciences (IMS), Yokohama, Kanagawa, Japan.
Elina KostyanovskayaThe Ben May Department for Cancer Research, The University of Chicago, USA.
Jana PawlakThe Ben May Department for Cancer Research, The University of Chicago, USA.
Junya YamagishiRIKEN Quantitative Biology Center (QBiC), Suita, Osaka, Japan.
Noriaki OkimotoRIKEN Quantitative Biology Center (QBiC), Suita, Osaka, Japan.
Makoto TaijiRIKEN Quantitative Biology Center (QBiC), Suita, Osaka, Japan.
Mariko OkadaRIKEN Center for Integrative Medical Sciences (IMS), Yokohama, Kanagawa, Japan.
Jody WestbrookDepartment of Molecular and Cell Biology, University of California Berkeley, Berkeley, CA, USA.
Yoko SattaDepartment of Evolutionary Studies of Biosystems, The Graduate University of Advanced Studies, Miura-gunn, Kanagawa, Japan.
Takanori KigawaRIKEN Quantitative Biology Center (QBiC), Yokohama, Kanagawa, Japan.
Akira ImamotoThe Ben May Department for Cancer Research, The University of Chicago, USA.
May Institute · USRIKEN Center for Integrative Medical Sciences · JPThe Graduate University for Advanced Studies, SOKENDAI · JPUniversity of California, Berkeley · USUniversity of Chicago · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

CRK and CRKL adapter proteins play essential roles in development and cancer through their SRC homology 2 and 3 (SH2 and SH3) domains. To gain insight into the origin of their shared functions, we have investigated their evolutionary history. We propose a term, crk/crkl ancestral (crka), for orthologs in invertebrates before the divergence of CRK and CRKL in the vertebrate ancestor. We have isolated two orthologs expressed in the choanoflagellate Monosiga brevicollis, a unicellular relative to the metazoans. Consistent with its highly-conserved three-dimensional structure, the SH2 domain of M. brevicollis crka1 can bind to the mammalian CRK/CRKL SH2 binding consensus phospho-YxxP, and to the SRC substrate/focal adhesion protein BCAR1 (p130

Identifiers

PMID27686861
PMCPMC5043372
OpenAlexW2524849789

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.