Evidence map›Paper›PMID 27686613›Full record

ArticleAmerican journal of physiology. Gastrointestinal and liver physiology2016

Comprehensive analysis of microRNA signature of mouse pancreatic acini: overexpression of miR-21-3p in acute pancreatitis.

Ajay Kumar Dixit, Anne E Sarver, Zuobiao Yuan, John George, Usman Barlass, Hassam Cheema, Archana Sareen, Sulagna Banerjee, Vikas Dudeja, Rajinder Dawra and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of physiology. Gastrointestinal and liver physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. miR-122-5p is involved in posttranscriptional regulation of the mitochondrial thiamin pyrophosphate transporter (American journal of physiology. Gastrointestinal and liver physiology · 2023
    Article
  7. Article
  8. The Role of MicroRNAs in Pancreatitis Development and Progression.International journal of molecular sciences · 2023
    Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. A microRNA checkpoint for CaMolecular therapy : the journal of the American Society of Gene Therapy · 2022
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Posttranscriptional regulation of thiamin transporter-1 expression by microRNA-200a-3p in pancreatic acinar cells.American journal of physiology. Gastrointestinal and liver physiology · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Ajay Kumar DixitDepartment of Surgery, Miller School of Medicine, University of Miami, Miami, Florida; and.
Anne E SarverDepartment of Surgery, Basic and Translational Research, University of Minnesota, Minneapolis, Minnesota.
Zuobiao YuanDepartment of Surgery, Basic and Translational Research, University of Minnesota, Minneapolis, Minnesota.
John GeorgeDepartment of Surgery, Miller School of Medicine, University of Miami, Miami, Florida; and.
Usman BarlassDepartment of Surgery, Basic and Translational Research, University of Minnesota, Minneapolis, Minnesota.
Hassam CheemaDepartment of Surgery, Miller School of Medicine, University of Miami, Miami, Florida; and.
Archana SareenDepartment of Surgery, Basic and Translational Research, University of Minnesota, Minneapolis, Minnesota.
Sulagna BanerjeeDepartment of Surgery, Miller School of Medicine, University of Miami, Miami, Florida; and.
Vikas DudejaDepartment of Surgery, Miller School of Medicine, University of Miami, Miami, Florida; and.
Rajinder DawraDepartment of Surgery, Miller School of Medicine, University of Miami, Miami, Florida; and.
Subbaya SubramanianDepartment of Surgery, Basic and Translational Research, University of Minnesota, Minneapolis, Minnesota.
Ashok K SalujaDepartment of Surgery, Miller School of Medicine, University of Miami, Miami, Florida; and asaluja@miami.edu.
University of Miami · USUniversity of Minnesota · US

Funding

HEAT SHOCK PROTEINS AND PANCREATITISR01DK058694 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI RAMAKRISHNAN, SUNDARAM · 2001 to 2019
$5.4M
Relative Contribution of Trypsin & Inflammation in Acute & Chronic PancreatitisR01DK093047 · NIDDK · UNIVERSITY OF MINNESOTA · PI DAWRA, RAJINDER K · 2011 to 2021
$5.0M
Physiology and pathophysiology of human pancreatic acinar cellsR01DK092145 · NIDDK · UNIVERSITY OF MINNESOTA · PI SALUJA, ASHOK K · 2011 to 2014
$1.4M
NIDDK NIH HHS R01 DK058694NIDDK NIH HHS R01 DK092145NIDDK NIH HHS R01 DK093047
6 · The paper itself

Abstract

In the current study, we have characterized the global miRNA expression profile in mouse pancreatic acinar cells and during acute pancreatitis using next-generation RNA sequencing. We identified 324 known and six novel miRNAs that are expressed in mouse pancreatic acinar cells. In the basal state, miR-148a-3p, miR-375-3p, miR-217-5p, and miR-200a-3p were among the most abundantly expressed, whereas miR-24-5p and miR-421-3p were the least abundant. Treatment of acinar cells with caerulein (100 nM) and taurolithocholic acid 3-sulfate [TLC-S (250 μM)] induced numerous changes in miRNA expression profile. In particular, we found significant overexpression of miR-21-3p in acini treated with caerulein and TLC-S. We further looked at the expression of miR-21-3p in caerulein, l-arginine, and caerulein + LPS-induced acute pancreatitis mouse models and found 12-, 21-, and 50-fold increased expression in the pancreas, respectively. In summary, this is the first comprehensive analysis of global miRNA expression profile of mouse pancreatic acinar cells in normal and disease conditions. Our analysis shows that miR-21-3p expression level correlates with the severity of the disease.

Indexed as

Acinar CellsAnimalsCeruletideGene ExpressionGene Expression ProfilingHigh-Throughput Nucleotide SequencingMiceMicroRNAsPancreatitisTaurolithocholic AcidCeruletideMicroRNAsTaurolithocholic Acidtaurolithocholic acid 3-sulfate

Identifiers

PMID27686613
PMCPMC5130546
OpenAlexW2527104228

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.