Evidence map›Paper›PMID 27684715›Full record

ArticlePloS one

Large Genomic Imbalances in Brugada Syndrome.

Irene Mademont-Soler, Mel Lina Pinsach-Abuin, Helena Riuró, Jesus Mates, Alexandra Pérez-Serra, Mònica Coll, José Manuel Porres, Bernat Del Olmo, Anna Iglesias, Elisabet Selga and 9 more

Open access · goldAbstract read
In one paragraph

Article in PloS one. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 23 citations in OpenAlex.

  1. SCN5A mutation status increases the risk of major arrhythmic events in Asian populations with Brugada syndrome: systematic review and meta-analysis.Annals of noninvasive electrocardiology : the official journal of the International Society for Holter and Noninvasive Electrocardiology, Inc · 2019
    Pooled it
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  9. Brugada Syndrome: Oligogenic or Mendelian Disease?International journal of molecular sciences · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 3 institutions in 1 country.

Irene Mademont-SolerCardiovascular Genetics Center, University of Girona-IDIBGI, Girona, Spain.ORCID http://orcid.org/0000-0002-6501-9250
Mel Lina Pinsach-AbuinCardiovascular Genetics Center, University of Girona-IDIBGI, Girona, Spain.
Helena RiuróCardiovascular Genetics Center, University of Girona-IDIBGI, Girona, Spain.
Jesus MatesCardiovascular Genetics Center, University of Girona-IDIBGI, Girona, Spain.
Alexandra Pérez-SerraCardiovascular Genetics Center, University of Girona-IDIBGI, Girona, Spain.
Mònica CollCardiovascular Genetics Center, University of Girona-IDIBGI, Girona, Spain.
José Manuel PorresArrhythmia Unit, Hospital Universitario Donostia, San Sebastian, Spain.
Bernat Del OlmoCardiovascular Genetics Center, University of Girona-IDIBGI, Girona, Spain.
Anna IglesiasCardiovascular Genetics Center, University of Girona-IDIBGI, Girona, Spain.
Elisabet SelgaCardiovascular Genetics Center, University of Girona-IDIBGI, Girona, Spain.
Ferran PicóCardiovascular Genetics Center, University of Girona-IDIBGI, Girona, Spain.
Sara PagansCardiovascular Genetics Center, University of Girona-IDIBGI, Girona, Spain.
Carles Ferrer-CostaGendiag SL, Barcelona, Spain.
Geòrgia Sarquella-BrugadaArrhythmia Unit, Hospital Sant Joan de Déu, University of Barcelona, Barcelona, Spain.
Elena ArbeloArrhythmia Unit, Hospital Clinic de Barcelona, University of Barcelona, Barcelona, Spain.
Sergi CesarArrhythmia Unit, Hospital Clinic de Barcelona, University of Barcelona, Barcelona, Spain.
Josep BrugadaArrhythmia Unit, Hospital Sant Joan de Déu, University of Barcelona, Barcelona, Spain.
Óscar CampuzanoCardiovascular Genetics Center, University of Girona-IDIBGI, Girona, Spain.
Ramon BrugadaCardiovascular Genetics Center, University of Girona-IDIBGI, Girona, Spain.
Universitat de Girona · ESHospital Clínic de Barcelona · ESHospital Sant Joan de Déu Barcelona · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeBrugada syndrome (BrS) is a form of cardiac arrhythmia which may lead to sudden cardiac death. The recommended genetic testing (direct sequencing of SCN5A) uncovers disease-causing SNVs and/or indels in ~20% of cases. Limited information exists about the frequency of copy number variants (CNVs) in SCN5A in BrS patients, and the role of CNVs in BrS-minor genes is a completely unexplored field.

methods220 BrS patients with negative genetic results were studied to detect CNVs in SCN5A. 63 cases were also screened for CNVs in BrS-minor genes. Studies were performed by Multiplex ligation-dependent probe amplification or Next-Generation Sequencing (NGS).

resultsThe detection rate for CNVs in SCN5A was 0.45% (1/220). The detected imbalance consisted of a duplication from exon 15 to exon 28, and could potentially explain the BrS phenotype. No CNVs were found in BrS-minor genes.

conclusionCNVs in current BrS-related genes are uncommon among BrS patients. However, as these rearrangements may underlie a portion of cases and they undergo unnoticed by traditional sequencing, an appealing alternative to conventional studies in these patients could be targeted NGS, including in a single experiment the study of SNVs, indels and CNVs in all the known BrS-related genes.

Identifiers

PMID27684715
PMCPMC5042553
OpenAlexW2525551034

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.