Evidence map›Paper›PMID 27683249›Full record

ArticleMicrobiologyOpen2017

AhpA is a peroxidase expressed during biofilm formation in Bacillus subtilis.

Joelie V Zwick, Sarah Noble, Yasser K Ellaicy, Gabrielle Dierker Coe, Dylan J Hakey, Alyssa N King, Alex J Sadauskas, Melinda J Faulkner

Open access · goldAbstract read
In one paragraph

Article in MicrobiologyOpen, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.3field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Applied and environmental microbiology · 2019
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Joelie V ZwickDepartment of Biology, Bradley University, Peoria, IL, USA.
Sarah NobleDepartment of Biology, Bradley University, Peoria, IL, USA.
Yasser K EllaicyDepartment of Biology, Bradley University, Peoria, IL, USA.
Gabrielle Dierker CoeDepartment of Biology, Bradley University, Peoria, IL, USA.
Dylan J HakeyDepartment of Biology, Bradley University, Peoria, IL, USA.
Alyssa N KingDepartment of Biology, Bradley University, Peoria, IL, USA.
Alex J SadauskasDepartment of Biology, Bradley University, Peoria, IL, USA.
Melinda J FaulknerDepartment of Biology, Bradley University, Peoria, IL, USA.ORCID 0000-0003-1192-1481
Bradley University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Organisms growing aerobically generate reactive oxygen species such as hydrogen peroxide. These reactive oxygen molecules damage enzymes and DNA, potentially causing cell death. In response, Bacillus subtilis produces at least nine potential peroxide-scavenging enzymes; two belong to the alkylhydroperoxide reductase (Ahp) class of peroxidases. Here, we explore the role of one of these Ahp homologs, AhpA. While previous studies demonstrated that AhpA can scavenge peroxides and thus defend cells against peroxides, they did not clarify when during growth the cell produces AhpA. The results presented here show that the expression of ahpA is regulated in a manner distinct from that of the other peroxide-scavenging enzymes in B. subtilis. While the primary Ahp, AhpC, is expressed during exponential growth and stationary phase, these studies demonstrate that the expression of ahpA is dependent on the transition-state regulator AbrB and the sporulation and biofilm formation transcription factor Spo0A. Furthermore, these results show that ahpA is specifically expressed during biofilm formation, and not during sporulation or stationary phase, suggesting that derepression of ahpA by AbrB requires a signal other than those present upon entry into stationary phase. Despite this expression pattern, ahpA mutant strains still form and maintain robust biofilms, even in the presence of peroxides. Thus, the role of AhpA with regard to protecting cells within biofilms from environmental stresses is still uncertain. These studies highlight the need to further study the Ahp homologs to better understand how they differ from one another and the unique roles they may play in oxidative stress resistance.

Indexed as

Bacillus subtilisBacterial ProteinsBiofilmsDNA-Binding ProteinsDNA DamageHydrogen PeroxideOxidative StressPeroxidasesSpores, BacterialTranscription FactorsAbrB protein, Bacillus subtilisBacterial ProteinsDNA-Binding ProteinsHydrogen PeroxidePeroxidasesSpo0A protein, Bacillus subtilisTranscription FactorsAbrBAhpCalkylhydroperoxide reductasebiofilm formationoxidative stressperoxideperoxiredoxinSpo0Asporulation

Identifiers

PMID27683249
PMCPMC5300871
OpenAlexW2526952148

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.