Evidence map›Paper›PMID 27682804›Full record

ArticleMicrobes and environments2016

In Situ Cultivation Allows for Recovery of Bacterial Types Competitive in Their Natural Environment.

Dawoon Jung, Yoshiteru Aoi, Slava S Epstein

Open access · diamondAbstract read
In one paragraph

Article in Microbes and environments, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. How genomics can help unravel the evolution of endophytic fungi.World journal of microbiology & biotechnology · 2025
    Review
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  11. "Frontiers in microbiology · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Dawoon JungInstitute for Sustainable Sciences and development, Hiroshima University.
Yoshiteru Aoi
Slava S Epstein
Northeastern University · USHiroshima University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Standard cultivation fails to grow most microorganisms, whereas in situ cultivation allows for the isolation of comparatively diverse and novel microorganisms. Information on similarities and differences in the physiological properties of isolates obtained from in situ cultivation and standard cultivation is limited. Therefore, we used the arctic sediment samples and compared two culture collections obtained using standard and novel cultivation techniques. Even though there was no temperature selection at the isolation step, isolates from each method showed different reactions to temperature. The results of the present study suggest that isolates from in situ cultivation are more competitive in their natural environment.

Indexed as

BiotaEnvironmental MicrobiologyArctic RegionsBacterial Typing TechniquesCluster AnalysisDNA, RibosomalMicrobiological TechniquesPhylogenyRNA, Ribosomal, 16SSequence Analysis, DNATemperatureDNA, RibosomalRNA, Ribosomal, 16S

Identifiers

PMID27682804
PMCPMC5158119
OpenAlexW2526839652

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.