Evidence map›Paper›PMID 27682102›Full record

ArticleMicroorganisms2015

A Three-Component Microbial Consortium from Deep-Sea Salt-Saturated Anoxic Lake Thetis Links Anaerobic Glycine Betaine Degradation with Methanogenesis.

Violetta La Cono, Erika Arcadi, Gina La Spada, Davide Barreca, Giuseppina Laganà, Ersilia Bellocco, Maurizio Catalfamo, Francesco Smedile, Enzo Messina, Laura Giuliano and 1 more

Open access · goldAbstract read
In one paragraph

Article in Microorganisms, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
2.2field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Comparative Genomics of the GenusFrontiers in microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Violetta La ConoInstitute for Coastal Marine Environment, CNR, Spianata S. Raineri 86, Messina 98122, Italy. violetta.lacono@iamc.cnr.it.
Erika ArcadiInstitute for Coastal Marine Environment, CNR, Spianata S. Raineri 86, Messina 98122, Italy. eren@tiscali.it.
Gina La SpadaInstitute for Coastal Marine Environment, CNR, Spianata S. Raineri 86, Messina 98122, Italy. gina.laspada@iamc.cnr.it.
Davide BarrecaDepartment of Organic and Biological Chemistry, University of Messina, Salita Sperone 31, Villaggio S. Agata, Messina 98166, Italy. dbarreca@unime.it.
Giuseppina LaganàDepartment of Organic and Biological Chemistry, University of Messina, Salita Sperone 31, Villaggio S. Agata, Messina 98166, Italy. giuseppina.lagana@unime.it.
Ersilia BelloccoDepartment of Organic and Biological Chemistry, University of Messina, Salita Sperone 31, Villaggio S. Agata, Messina 98166, Italy. ersiliasanta.belocco@unime.it.
Maurizio CatalfamoInstitute for Coastal Marine Environment, CNR, Spianata S. Raineri 86, Messina 98122, Italy. maurizio.catalfamo@iamc.cnr.it.
Francesco SmedileInstitute for Coastal Marine Environment, CNR, Spianata S. Raineri 86, Messina 98122, Italy. francesco.smedile@iamc.cnr.it.
Enzo MessinaInstitute for Coastal Marine Environment, CNR, Spianata S. Raineri 86, Messina 98122, Italy. enzo.messina@iamc.cnr.it.
Laura GiulianoInstitute for Coastal Marine Environment, CNR, Spianata S. Raineri 86, Messina 98122, Italy. laura.giuliano@iamc.cnr.it.
Michail M YakimovInstitute for Coastal Marine Environment, CNR, Spianata S. Raineri 86, Messina 98122, Italy. michail.yakimov@iamc.cnr.it.
Institute for Coastal Marine Environment · ITUniversity of Messina · ITThe Mediterranean Science Commission · MC

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microbial communities inhabiting the deep-sea salt-saturated anoxic lakes of the Eastern Mediterranean operate under harsh physical-chemical conditions that are incompatible with the lifestyle of common marine microorganisms. Here, we investigated a stable three-component microbial consortium obtained from the brine of the recently discovered deep-sea salt-saturated Lake Thetis. The trophic network of this consortium, established at salinities up to 240, relies on fermentative decomposition of common osmoprotectant glycine betaine (GB). Similarly to known extreme halophilic anaerobic GB-degrading enrichments, the initial step of GB degradation starts with its reductive cleavage to trimethylamine and acetate, carried out by the fermenting member of the Thetis enrichment, Halobacteroides lacunaris TB21. In contrast to acetate, which cannot be easily oxidized in salt-saturated anoxic environments, trimethylamine represents an advantageous C₁-substrate for methylotrophic methanogenic member of the Thetis enrichment, Methanohalophilus sp. TA21. This second member of the consortium likely produces hydrogen via methylotrophic modification of reductive acetyl-CoA pathway because the initial anaerobic GB cleavage reaction requires the consumption of reducing equivalents. Ecophysiological role of the third member of the Thetis consortium, Halanaerobium sp. TB24, which lacks the capability of either GB or trimethylamine degradation, remains yet to be elucidated. As it is true for cultivated members of family Halanaerobiaceae, the isolate TB24 can obtain energy primarily by fermenting simple sugars and producing hydrogen as one of the end products. Hence, by consuming of TB21 and TA21 metabolites, Halanaerobium sp. TB24 can be an additional provider of reducing equivalents required for reductive degradation of GB. Description of the Thetis GB-degrading consortium indicated that anaerobic degradation of osmoregulatory molecules may play important role in the overall turnover of organic carbon in anoxic hypersaline biotopes.

Indexed as

deep-sea hypersaline anoxic lakesglycine betaine degradationmethanogenesismethylotrophic halophilesredoxicline

Identifiers

PMID27682102
PMCPMC5023251
OpenAlexW1878227398

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.