Evidence map›Paper›PMID 27681582›Full record

ArticleScientific reports2016

Cell biology is different in small volumes: endogenous signals shape phenotype of primary hepatocytes cultured in microfluidic channels.

Amranul Haque, Pantea Gheibi, Yandong Gao, Elena Foster, Kyung Jin Son, Jungmok You, Gulnaz Stybayeva, Dipali Patel, Alexander Revzin

Abstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Amranul HaqueDepartment of Biomedical Engineering, University of California Davis, CA 95616, USA.
Pantea GheibiDepartment of Biomedical Engineering, University of California Davis, CA 95616, USA.
Yandong GaoDepartment of Biomedical Engineering, University of California Davis, CA 95616, USA.
Elena FosterDepartment of Biomedical Engineering, University of California Davis, CA 95616, USA.
Kyung Jin SonDepartment of Biomedical Engineering, University of California Davis, CA 95616, USA.
Jungmok YouDepartment of Biomedical Engineering, University of California Davis, CA 95616, USA.
Gulnaz StybayevaDepartment of Biomedical Engineering, University of California Davis, CA 95616, USA.
Dipali PatelDepartment of Biomedical Engineering, University of California Davis, CA 95616, USA.
Alexander RevzinDepartment of Biomedical Engineering, University of California Davis, CA 95616, USA.

Funding

Designing a Microenvironment Niche for Liver-Specific Differentiation of hESCsR01DK079977 · NIDDK · UNIVERSITY OF CALIFORNIA AT DAVIS · PI REVZIN, ALEXANDER · 2010 to 2014
$1.8M
NIDDK NIH HHS R01 DK079977
6 · The paper itself

Abstract

The approaches for maintaining hepatocytes in vitro are aimed at recapitulating aspects of the native liver microenvironment through the use of co-cultures, surface coatings and 3D spheroids. This study highlights the effects of spatial confinement-a less studied component of the in vivo microenvironment. We demonstrate that hepatocytes cultured in low-volume microfluidic channels (microchambers) retain differentiated hepatic phenotype for 21 days whereas cells cultured in regular culture plates under identical conditions de-differentiate after 7 days. Careful consideration of nutrient delivery and oxygen tension suggested that these factors could not solely account for enhanced cell function in microchambers. Through a series of experiments involving microfluidic chambers of various heights and inhibition of key molecular pathways, we confirmed that phenotype of hepatocytes in small volumes was shaped by endogenous signals, both hepato-inductive growth factors (GFs) such as hepatocyte growth factor (HGF) and hepato-disruptive GFs such as transforming growth factor (TGF)-β1. Hepatocytes are not generally thought of as significant producers of GFs-this role is typically assigned to nonparenchymal cells of the liver. Our study demonstrates that, in an appropriate microenvironment, hepatocytes produce hepato-inductive and pro-fibrogenic signals at the levels sufficient to shape their phenotype and function.

Identifiers

PMID27681582
PMCPMC5041105

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.