Evidence map›Paper›PMID 27680513›Full record

ArticleProtein science : a publication of the Protein Society2016

Simulation study of the ability of a computationally-designed peptide to recognize target tRNA

Xingqing Xiao, Binwu Zhao, Paul F Agris, Carol K Hall

Abstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Design of 8-mer Peptides that BlockbioRxiv : the preprint server for biology · 2023
    Article
  4. Article
  5. ACS chemical biology · 2022
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Xingqing XiaoChemical and Biomolecular Engineering Department, North Carolina State University, Raleigh, North Carolina, 95-2767905.
Binwu ZhaoChemical and Biomolecular Engineering Department, North Carolina State University, Raleigh, North Carolina, 95-2767905.
Paul F AgrisThe RNA Institute, University at Albany, State University of New York, Albany, New York, 12222.
Carol K HallChemical and Biomolecular Engineering Department, North Carolina State University, Raleigh, North Carolina, 95-2767905.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this paper, we investigate the ability of our computationally-designed peptide, Pept10 (PNWNGNRWLNNCLRG), to recognize the anticodon stem and loop (ASL) domain of the hypermodified tRNA

Indexed as

Molecular Dynamics SimulationThermodynamicsHumansPeptidesRNA, Transfer, LysPeptidesRNA, Transfer, Lysbinding of RNA and peptidebinding uniquenessmolecular recognition mechanismtarget tRNALys3UUU

Identifiers

PMID27680513
PMCPMC5119567

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.