Evidence map›Paper›PMID 27680505›Full record

ArticleJournal of cellular and molecular medicine2017

The possible roles of B-cell novel protein-1 (BCNP1) in cellular signalling pathways and in cancer.

Sapan J Patel, Gaurang L Trivedi, Costel C Darie, Bayard D Clarkson

Open access · goldAbstract read
In one paragraph

Article in Journal of cellular and molecular medicine, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Sapan J PatelMemorial Sloan Kettering Cancer Center, Molecular Pharmacology and Chemistry Program, New York, NY, USA.
Gaurang L TrivediCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Costel C DarieDepartment of Chemistry and Biomolecular Science, Clarkson University, Biochemistry and Proteomics Group, Potsdam, NY, USA.ORCID 0000-0001-6402-2311
Bayard D ClarksonMemorial Sloan Kettering Cancer Center, Molecular Pharmacology and Chemistry Program, New York, NY, USA.
Memorial Sloan Kettering Cancer Center · USClarkson University · USCold Spring Harbor Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

B-cell novel protein-1 (BCNP1) or Family member of 129C (FAM129C) was identified as a B-cell-specific plasma-membrane protein. Bioinformatics analysis predicted that BCNP1 might be heavily phosphorylated. The BCNP1 protein contains a pleckstrin homology (PH) domain, two proline-rich (PR) regions and a Leucine Zipper (LZ) domain suggesting that it may be involved in protein-protein interactions. Using The Cancer Genome Atlas (TCGA) data sets, we investigated the correlation of alteration of the BCNP1 copy-number changes and mutations in several cancer types. We also investigated the function of BCNP1 in cellular signalling pathways. We found that BCNP1 is highly altered in some types of cancers and that BCNP1 copy-number changes and mutations co-occur with other molecular alteration events for TP53 (tumour protein P53), PIK3CA (Phosphatidylinositol-4,5-Bisphosphate 3-Kinase, Catalytic Subunit Alpha), MAPK1 (mitogen-activated protein kinase-1; ERK: extracellular signal regulated kinase), KRAS (Kirsten rat sarcoma viral oncogene homolog) and AKT2 (V-Akt Murine Thymoma Viral Oncogene Homolog 2). We also found that PI3K (Phoshoinositide 3-kinase) inhibition and p38 MAPK (p38 mitogen-activated protein kinase) activation leads to reduction in phosphorylation of BCNP1 at serine residues, suggesting that BCNP1 phosphorylation is PI3K and p38MAPK dependent and that it might be involved in cancer. Its degradation depends on a proteasome-mediated pathway.

Indexed as

Apoptosis Regulatory ProteinsCell LineClass I Phosphatidylinositol 3-KinasesDNA Copy Number VariationsHEK293 CellsHumansMembrane ProteinsMitogen-Activated Protein Kinase 1MutationNeoplasm ProteinsNeoplasmsp38 Mitogen-Activated Protein KinasesPhosphatidylinositol 3-KinasesPhosphorylationProto-Oncogene Proteins c-aktProto-Oncogene Proteins p21(ras)AKT2 protein, humanApoptosis Regulatory ProteinsClass I Phosphatidylinositol 3-KinasesKRAS protein, humanMAPK1 protein, humanMembrane ProteinsMitogen-Activated Protein Kinase 1Neoplasm ProteinsNIBAN3 protein, humanp38 Mitogen-Activated Protein KinasesPhosphatidylinositol 3-KinasesPIK3CA protein, humanProto-Oncogene Proteins c-aktProto-Oncogene Proteins p21(ras)Tumor Suppressor Protein p53B-cell novel protein-1bioinformaticsfamily member of 129Cp38 MAPKphoshoinositide 3-kinase

Identifiers

PMID27680505
PMCPMC5323820
OpenAlexW2523880877

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.