Evidence map›Paper›PMID 27679847›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Intracellular mechanisms of molecular recognition and sorting for transport of large extracellular matrix molecules.

Yoshihiro Ishikawa, Shinya Ito, Kazuhiro Nagata, Lynn Y Sakai, Hans Peter Bächinger

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 117 citations in OpenAlex.

  1. Backbone and side chainBiomolecular NMR assignments · 2026
    Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Collagen IV biosynthesis: Intracellular choreography of post-translational modifications.Matrix biology : journal of the International Society for Matrix Biology · 2025
    Review
  7. Review
  8. Beyond classical collagen: basement membrane collagen IV in age-associated lung diseases.European respiratory review : an official journal of the European Respiratory Society · 2025
    Review
  9. [Research progress on collagen secretion mechanisms in scarring].Zhejiang da xue xue bao. Yi xue ban = Journal of Zhejiang University. Medical sciences · 2025
    Review
  10. Deciphering the folding code of collagens.Nature communications · 2025
    Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. A model for collagen secretion by intercompartmental continuities.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  18. ER exit in physiology and disease.Frontiers in molecular biosciences · 2024
    Review
  19. Sorting and Export of Proteins at the Endoplasmic Reticulum.Cold Spring Harbor perspectives in biology · 2023
    Review
  20. Article

10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Yoshihiro IshikawaResearch Department, Shriners Hospital for Children, Portland, OR 97239; Department of Biochemistry and Molecular Biology, Oregon Health & Science University, Portland, OR 97239.
Shinya ItoDepartment of Molecular Biosciences, Faculty of Life Sciences, Kyoto Sangyo University, Kyoto 603-8555, Japan.
Kazuhiro NagataDepartment of Molecular Biosciences, Faculty of Life Sciences, Kyoto Sangyo University, Kyoto 603-8555, Japan.
Lynn Y SakaiResearch Department, Shriners Hospital for Children, Portland, OR 97239; Department of Biochemistry and Molecular Biology, Oregon Health & Science University, Portland, OR 97239.
Hans Peter BächingerResearch Department, Shriners Hospital for Children, Portland, OR 97239; Department of Biochemistry and Molecular Biology, Oregon Health & Science University, Portland, OR 97239; hpb@shcc.org.
Kyoto Sangyo University · JPOregon Health & Science University · USShriners Hospitals for Children - Portland · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Extracellular matrix (ECM) proteins are biosynthesized in the rough endoplasmic reticulum (rER) and transported via the Golgi apparatus to the extracellular space. The coat protein complex II (COPII) transport vesicles are approximately 60-90 nm in diameter. However, several ECM molecules are much larger, up to several hundreds of nanometers. Therefore, special COPII vesicles are required to coat and transport these molecules. Transmembrane Protein Transport and Golgi Organization 1 (TANGO1) facilitates loading of collagens into special vesicles. The Src homology 3 (SH3) domain of TANGO1 was proposed to recognize collagen molecules, but how the SH3 domain recognizes various types of collagen is not understood. Moreover, how are large noncollagenous ECM molecules transported from the rER to the Golgi? Here we identify heat shock protein (Hsp) 47 as a guide molecule directing collagens to special vesicles by interacting with the SH3 domain of TANGO1. We also consider whether the collagen secretory model applies to other large ECM molecules.

Indexed as

Aryl Hydrocarbon Receptor Nuclear TranslocatorCollagenCOP-Coated VesiclesEndoplasmic ReticulumExtracellular MatrixExtracellular Matrix ProteinsFibrillin-1Gene ExpressionGolgi ApparatusHSP47 Heat-Shock ProteinsHumansIntracellular SpaceProtein BindingProtein Interaction Domains and MotifsProtein TransportRecombinant ProteinsARNT protein, humanAryl Hydrocarbon Receptor Nuclear TranslocatorCollagenExtracellular Matrix ProteinsFibrillin-1HSP47 Heat-Shock ProteinsRecombinant ProteinscollagenCOPII vesiclesHsp47secretionTANGO1

Identifiers

PMID27679847
PMCPMC5068301
OpenAlexW2525031131

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.