Evidence map›Paper›PMID 27678309›Full record

ArticleScientific reports2016

Functional characterization of p53 pathway components in the ancient metazoan Trichoplax adhaerens.

Jia Wei Siau, Cynthia R Coffill, Weiyun Villien Zhang, Yaw Sing Tan, Juliane Hundt, David Lane, Chandra Verma, Farid Ghadessy

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.0field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Exon 3 of theG3 (Bethesda, Md.) · 2019
    Article
  8. Article
  9. Anatomy of Mdm2 and Mdm4 in evolution.Journal of molecular cell biology · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Jia Wei Siaup53Lab (A*STAR), 8A Biomedical Grove, #06-04/05 Neuros 138648, Singapore.
Cynthia R Coffillp53Lab (A*STAR), 8A Biomedical Grove, #06-04/05 Neuros 138648, Singapore.
Weiyun Villien Zhangp53Lab (A*STAR), 8A Biomedical Grove, #06-04/05 Neuros 138648, Singapore.
Yaw Sing TanBioinformatics Institute (A*STAR), 30 Biopolis Str, 07-01 Matrix 138671, Singapore.
Juliane HundtTechnical University Munich, School of Life Sciences Weihenstephan, Alte Akademie 8, 85354 Freising, Germany.
David Lanep53Lab (A*STAR), 8A Biomedical Grove, #06-04/05 Neuros 138648, Singapore.
Chandra VermaBioinformatics Institute (A*STAR), 30 Biopolis Str, 07-01 Matrix 138671, Singapore.
Farid Ghadessyp53Lab (A*STAR), 8A Biomedical Grove, #06-04/05 Neuros 138648, Singapore.
Agency for Science, Technology and Research · SGBioinformatics Institute · SGTechnical University of Munich · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The identification of genes encoding a p53 family member and an Mdm2 ortholog in the ancient placozoan Trichoplax adhaerens advocates for the evolutionary conservation of a pivotal stress-response pathway observed in all higher eukaryotes. Here, we recapitulate several key functionalities ascribed to this known interacting protein pair by analysis of the placozoan proteins (Tap53 and TaMdm2) using both in vitro and cellular assays. In addition to interacting with each other, the Tap53 and TaMdm2 proteins are also able to respectively bind human Mdm2 and p53, providing strong evidence for functional conservation. The key p53-degrading function of Mdm2 is also conserved in TaMdm2. Tap53 retained DNA binding associated with p53 transcription activation function. However, it lacked transactivation function in reporter genes assays using a heterologous cell line, suggesting a cofactor incompatibility. Overall, the data supports functional roles for TaMdm2 and Tap53, and further defines the p53 pathway as an evolutionary conserved fulcrum mediating cellular response to stress.

Identifiers

PMID27678309
PMCPMC5039725
OpenAlexW2527548600

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.