Evidence map›Paper›PMID 27677291›Full record

ArticleJournal of molecular evolution2016

Phylogenetic Analysis of Molluscan Metallothioneins: Evolutionary Insight from Crassostrea virginica.

Matthew J Jenny, Samantha L Payton, David A Baltzegar, Jeffrey D Lozier

Abstract read
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In one paragraph

Article in Journal of molecular evolution, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Metals and metallothionein evolution in snails: a contribution to the concept of metal-specific functionality from an animal model group.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2024
    Review
  3. Article
  4. Article
  5. Article
  6. Modular Evolution and Population Variability ofFrontiers in cell and developmental biology · 2021
    Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Matthew J JennyDepartment of Biological Sciences, University of Alabama, Box 870344, Tuscaloosa, AL, 35487-0344, USA. mjjenny@ua.edu.
Samantha L PaytonDepartment of Biological Sciences, University of Alabama, Box 870344, Tuscaloosa, AL, 35487-0344, USA.
David A BaltzegarGenomic Sciences Laboratory, North Carolina State University, Campus Box 7614, Raleigh, NC, 27695, USA.
Jeffrey D LozierDepartment of Biological Sciences, University of Alabama, Box 870344, Tuscaloosa, AL, 35487-0344, USA.
University of Alabama · USNorth Carolina State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mechanisms by which organisms genetically adapt to environmental conditions are of fundamental importance to studies of evolutionary biology and environmental physiology. Natural selection acts on existing genetic variation leading to adaptation through selection of new mutations that confer beneficial advantages to populations. The American oyster, Crassostrea virginica, is an excellent model to investigate interactions between environmental and ecological factors as driving forces for natural selection. A great example of this is represented by the diversity of C. virginica metallothioneins (CvMT), metal-binding proteins involved in homeostasis and tolerance, that have resulted from a series of duplication events to produce the greatest structural diversity of MT proteins found in a single species. We present phylogenetic evidence of two distinct ancestral β-domain MTs that gave rise to a variety of ββ and αβ CvMT proteins, as well as CvMT-II proteins consisting solely of one to four α-domains. Furthermore, we annotate the complete locus containing the paralogous CvMT-I, -II, and -IV genes, providing supporting evidence of a hypothesized series of exon and gene duplication events that gave rise to the various CvMT-I and -II isoforms. We also highlight unique MT expression profiles from four separate C. virginica populations to demonstrate differences in gene diversity and copy number which appear to be enriched in southeastern U.S. oyster populations. These observations contribute to a better understanding of the molecular mechanisms leading to adaptation in organisms that experience substantial environmental stress, with a specific focus on evolutionary adaptations of gene structure.

Indexed as

Amino AcidsAnimalsBiological EvolutionCrassostreaExonsGene DuplicationGene Expression RegulationMetallothioneinPhylogenyProtein IsoformsSequence Analysis, ProteinAmino AcidsMetallothioneinProtein IsoformsAdaptationGene duplicationMetallothioneinMolecular evolutionMolluscs

Identifiers

PMID27677291
OpenAlexW2525339465

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.