Evidence map›Paper›PMID 27676224›Full record

ArticleACS infectious diseases2016

Structure-Activity Relationships of the MEPicides: N-Acyl and O-Linked Analogs of FR900098 as Inhibitors of Dxr from Mycobacterium tuberculosis and Yersinia pestis.

Géraldine San Jose, Emily R Jackson, Amanda Haymond, Chinchu Johny, Rachel L Edwards, Xu Wang, R Carl Brothers, Emma K Edelstein, Audrey R Odom, Helena I Boshoff and 2 more

Abstract read
In one paragraph

Article in ACS infectious diseases, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
3.3field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. New Application ofMolecules (Basel, Switzerland) · 2023
    Article
  5. MEPicides: α,β-unsaturated FosmidomycinACS infectious diseases · 2023
    Article
  6. Review
  7. Review
  8. Phosphoryl Prodrugs: Characteristics to Improve Drug Development.Medicinal chemistry research : an international journal for rapid communications on design and mechanisms of action of biologically active agents · 2022
    Article
  9. Mechanism of Action ofACS omega · 2021
    Article
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  12. Article
  13. Article
  14. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Géraldine San JoseDepartment of Chemistry, George Washington University , 800 22nd Street NW, Washington D.C. 20052, United States.
Emily R JacksonDepartment of Chemistry, George Washington University , 800 22nd Street NW, Washington D.C. 20052, United States.
Amanda HaymondDepartment of Chemistry and Biochemistry, George Mason University , 10900 University Boulevard, Manassas, Virginia 20110, United States.
Chinchu JohnyDepartment of Chemistry and Biochemistry, George Mason University , 10900 University Boulevard, Manassas, Virginia 20110, United States.
Rachel L EdwardsDepartment of Pediatrics, Washington University School of Medicine , 660 S Euclid Avenue, St. Louis, Missouri 63110, United States.
Xu WangDepartment of Chemistry, George Washington University , 800 22nd Street NW, Washington D.C. 20052, United States.
R Carl BrothersDepartment of Chemistry, George Washington University , 800 22nd Street NW, Washington D.C. 20052, United States.
Emma K EdelsteinDepartment of Chemistry, George Washington University , 800 22nd Street NW, Washington D.C. 20052, United States.
Audrey R OdomDepartment of Pediatrics, Washington University School of Medicine , 660 S Euclid Avenue, St. Louis, Missouri 63110, United States.
Helena I BoshoffTuberculosis Research Section, LCID, NIAID/NIH , 9000 Rockville Pike, Bethesda, Maryland 20892, United States.
Robin D CouchDepartment of Chemistry and Biochemistry, George Mason University , 10900 University Boulevard, Manassas, Virginia 20110, United States.
Cynthia S DowdDepartment of Chemistry, George Washington University , 800 22nd Street NW, Washington D.C. 20052, United States.
George Washington University · USGeorge Mason University · USWashington University in St. Louis · USNational Institutes of Health · US

Funding

MEP pathway resistance in Plasmodium falciparumR01AI103280 · NIAID · WASHINGTON UNIVERSITY · PI Audrey Ragan Odom John · 2013 to 2026
$5.5M
Inhibition of MEP pathway Isoprenoid BiosynthesisR01AI123433 · NIAID · GEORGE WASHINGTON UNIVERSITY · PI DOWD, CYNTHIA SCHIECK, MEYERS, MARVIN J · 2016 to 2020
$2.6M
Inhibition of the Nonmevalonate pathway to Kill Mycobacterium tuberculosisRC1AI086453 · NIAID · GEORGE WASHINGTON UNIVERSITY · PI DOWD, CYNTHIA SCHIECK · 2009 to 2010
$722k
TARGETING ISPC TO TREAT MALARIAR21AI123808 · NIAID · WASHINGTON UNIVERSITY · PI ODOM JOHN, AUDREY RAGAN · 2016 to 2017
$440k
GE AKTAEXPLORER CHROMOTOGRAPHY SYSTEMS10RR026891 · NCRR · WASHINGTON UNIVERSITY · PI ODOM JOHN, AUDREY RAGAN · 2010 to 2010
$122k
NCRR NIH HHS S10 RR026891NIAID NIH HHS R01 AI103280NIAID NIH HHS R01 AI123433NIAID NIH HHS R21 AI123808NIAID NIH HHS RC1 AI086453
6 · The paper itself

Abstract

Despite continued research efforts, the threat of drug resistance from a variety of bacteria continues to plague clinical communities. Discovery and validation of novel biochemical targets will facilitate development of new drugs to combat these organisms. The methylerythritol phosphate (MEP) pathway to make isoprene units is a biosynthetic pathway essential to many bacteria. We and others have explored inhibitors of the MEP pathway as novel antibacterial agents. Mycobacterium tuberculosis, the causative agent of tuberculosis, and Yersinia pestis, resulting in the plague or "black death", both rely on the MEP pathway for isoprene production. 1-Deoxy-d-xylulose 5-phosphate reductoisomerase (Dxr) catalyzes the first committed step in the MEP pathway. We examined two series of Dxr inhibitors based on the parent structure of the retrohydroxamate natural product FR900098. The compounds contain either an extended N-acyl or O-linked alkyl/aryl group and are designed to act as bisubstrate inhibitors of the enzyme. While nearly all of the compounds inhibited both Mtb and Yp Dxr to some extent, compounds generally displayed more potent inhibition against the Yp homologue, with the best analogs displaying nanomolar IC

Indexed as

Aldose-Ketose IsomerasesAnti-Bacterial AgentsAntitubercular AgentsBacterial ProteinsBiosynthetic PathwaysEnzyme InhibitorsMycobacterium tuberculosisStructure-Activity RelationshipYersinia pestis1-deoxy-D-xylulose 5-phosphate reductoisomeraseAldose-Ketose IsomerasesAnti-Bacterial AgentsAntitubercular AgentsBacterial ProteinsEnzyme InhibitorsantibioticMEP pathwayMycobacterium tuberculosisphosphonate prodrugYersinia pestis

Identifiers

PMID27676224
PMCPMC5266543
OpenAlexW2524154508

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.