Evidence map›Paper›PMID 27672145›Full record

ArticlePhilosophical transactions of the Royal Society of London. Series B, Biological sciences2016

Single-molecule imaging of electroporated dye-labelled CheY in live Escherichia coli.

Diana Di Paolo, Oshri Afanzar, Judith P Armitage, Richard M Berry

Open access · bronzeAbstract read
In one paragraph

Article in Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Article
  3. Nanopore-mediated protein delivery enabling three-color single-molecule tracking in living cells.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Review
  9. The new bacteriology.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Diana Di PaoloBiological Physics Research Group, Clarendon Laboratory, Department of Physics, University of Oxford, Oxford OX1 3PU, UK.
Oshri AfanzarDepartment of Biological Chemistry, The Weizmann Institute of Science, 7610001 Rehovot, Israel.
Judith P ArmitageDepartment of Biochemistry, University of Oxford, Oxford OX1 3QU, UK.
Richard M BerryBiological Physics Research Group, Clarendon Laboratory, Department of Physics, University of Oxford, Oxford OX1 3PU, UK richard.berry@physics.ox.ac.uk.
University of Oxford · GBWeizmann Institute of Science · IL

Funding

Biotechnology and Biological Sciences Research Council BB/E00458X/1Biotechnology and Biological Sciences Research Council BB/H01991X/1
6 · The paper itself

Abstract

For the past two decades, the use of genetically fused fluorescent proteins (FPs) has greatly contributed to the study of chemotactic signalling in Escherichia coli including the activation of the response regulator protein CheY and its interaction with the flagellar motor. However, this approach suffers from a number of limitations, both biological and biophysical: for example, not all fusions are fully functional when fused to a bulky FP, which can have a similar molecular weight to its fused counterpart; they may interfere with the native interactions of the protein and the chromophores of FPs have low brightness and photostability and fast photobleaching rates. A recently developed technique for the electroporation of fluorescently labelled proteins in live bacteria has enabled us to bypass these limitations and study the in vivo behaviour of CheY at the single-molecule level. Here we show that purified CheY proteins labelled with organic dyes can be internalized into E. coli cells in controllable concentrations and imaged with video fluorescence microscopy. The use of this approach is illustrated by showing single CheY molecules diffusing within cells and interacting with the sensory clusters and the flagellar motors in real time.This article is part of the themed issue 'The new bacteriology'.

Indexed as

ElectroporationEscherichia coliEscherichia coli ProteinsLuminescent ProteinsMethyl-Accepting Chemotaxis ProteinsMicroscopy, FluorescenceSingle Molecule ImagingcheY protein, E coliEscherichia coli ProteinsLuminescent ProteinsMethyl-Accepting Chemotaxis Proteinsbacterial motilitychemotaxiselectroporationsingle-molecule fluorescence microscopy

Identifiers

PMID27672145
PMCPMC5052738
OpenAlexW2525406749

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.