Evidence map›Paper›PMID 27671660›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Mitochondrial DNA from the eradicated European Plasmodium vivax and P. falciparum from 70-year-old slides from the Ebro Delta in Spain.

Pere Gelabert, Marcela Sandoval-Velasco, Iñigo Olalde, Rosa Fregel, Adrien Rieux, Raül Escosa, Carles Aranda, Krijn Paaijmans, Ivo Mueller, M Thomas P Gilbert and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 60 citations in OpenAlex.

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  5. Pathogen prospecting of museums: Reconstructing malaria epidemiology.Proceedings of the National Academy of Sciences of the United States of America · 2024
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  8. NovelLancet regional health. Americas · 2023
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  14. Intestinal helminths as a biomolecular complex in archaeological research.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Article
  15. Ape Origins of Human Malaria.Annual review of microbiology · 2020
    Review
  16. Article
  17. Metagenomic analysis of a blood stain from the French revolutionary Jean-Paul Marat (1743-1793).Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2020
    Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 7 institutions in 7 countries.

Pere GelabertInstitute of Evolutionary Biology (Consejo Superior de Investigaciones Científicas-Universitat Pompeu Fabra), 08003 Barcelona, Spain.
Marcela Sandoval-VelascoEvoGenomics, Natural History Museum of Denmark, University of Copenhagen, 1350 Copenhagen, Denmark.
Iñigo OlaldeInstitute of Evolutionary Biology (Consejo Superior de Investigaciones Científicas-Universitat Pompeu Fabra), 08003 Barcelona, Spain.
Rosa FregelDepartment of Genetics, Stanford University, Stanford, CA 94305.
Adrien RieuxAgricultural Research for Development (CIRAD), Systèmes biologiques (BIOS) Department, Peuplements végétaux et bioagresseurs en milieu tropical (PVBMT) Laboratory, 97410 St. Pierre de la Réunion, France.
Raül EscosaConsorci de Polítiques Ambientals de les Terres de l'Ebre, 43580 Deltebre, Spain.
Carles ArandaServei de Control de Mosquits, Consell Comarcal del Baix Llobregat, 08980 Sant Feliu de Llobregat, Spain.
Krijn PaaijmansISGlobal, Barcelona Institute for Global Health, Hospital Clínic-Universitat de Barcelona, 08036 Barcelona, Spain.
Ivo MuellerISGlobal, Barcelona Institute for Global Health, Hospital Clínic-Universitat de Barcelona, 08036 Barcelona, Spain; Population Health and Immunity Division, Walter & Eliza Hall Institute, Parkville, 3052 VIC, Australia; Department of Medical Biology, University of Melbourne, Parkville, 3052 VIC, Australia.
M Thomas P GilbertEvoGenomics, Natural History Museum of Denmark, University of Copenhagen, 1350 Copenhagen, Denmark; Trace and Environmental DNA Laboratory, Department of Environment and Agriculture, Curtin University, Perth, 6102 WA, Australia; Norwegian University of Science and Technology (NTNU) University Museum, N-7491 Trondheim, Norway.
Carles Lalueza-FoxInstitute of Evolutionary Biology (Consejo Superior de Investigaciones Científicas-Universitat Pompeu Fabra), 08003 Barcelona, Spain; carles.lalueza@upf.edu.
Pompeu Fabra University · ESUniversitat de Barcelona · ESCentre de Coopération Internationale en Recherche Agronomique pour le Développement · FRConsejo Superior de Investigaciones Científicas · ESCurtin University · AUNatural History Museum Aarhus · DKStanford University · US

Funding

European Research Council 681396
6 · The paper itself

Abstract

Phylogenetic analysis of Plasmodium parasites has indicated that their modern-day distribution is a result of a series of human-mediated dispersals involving transport between Africa, Europe, America, and Asia. A major outstanding question is the phylogenetic affinity of the malaria causing parasites Plasmodium vivax and falciparum in historic southern Europe-where it was endemic until the mid-20th century, after which it was eradicated across the region. Resolving the identity of these parasites will be critical for answering several hypotheses on the malaria dispersal. Recently, a set of slides with blood stains of malaria-affected people from the Ebro Delta (Spain), dated between 1942 and 1944, have been found in a local medical collection. We extracted DNA from three slides, two of them stained with Giemsa (on which Plasmodium parasites could still be seen under the microscope) and another one consisting of dried blood spots. We generated the data using Illumina sequencing after using several strategies aimed at increasing the Plasmodium DNA yield: depletion of the human genomic (g)DNA content through hybridization with human gDNA baits, and capture-enrichment using gDNA derived from P. falciparum Plasmodium mitochondrial genome sequences were subsequently reconstructed from the resulting data. Phylogenetic analysis of the eradicated European P. vivax mtDNA genome indicates that the European isolate is closely related to the most common present-day American haplotype and likely entered the American continent post-Columbian contact. Furthermore, the European P. falciparum mtDNA indicates a link with current Indian strains that is in agreement with historical accounts.

Indexed as

Disease EradicationDNA, MitochondrialDNA, ProtozoanHaplotypesLikelihood FunctionsPhylogenyPlasmodium falciparumPlasmodium vivaxSequence Analysis, DNASpainDNA, MitochondrialDNA, ProtozoanEuropemalariamicroscopy slidespaleogeneticsPlasmodium

Identifiers

PMID27671660
PMCPMC5068322
OpenAlexW2526093310

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.