Evidence map›Paper›PMID 27670817›Full record

ArticlePlant physiology2016

The Genetics of Leaf Flecking in Maize and Its Relationship to Plant Defense and Disease Resistance.

Bode A Olukolu, Yang Bian, Brian De Vries, William F Tracy, Randall J Wisser, James B Holland, Peter J Balint-Kurti

Open access · greenAbstract read
In one paragraph

Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Advances in Understanding Defense Mechanisms inFrontiers in plant science · 2021
    Review
  7. Review
  8. Article
  9. AG3 (Bethesda, Md.) · 2019
    Article
  10. Article
  11. Article
  12. Review
  13. Genetic dissection of the maize (Zea mays L.) MAMP response.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Bode A OlukoluDepartment of Plant Pathology, North Carolina State University, Raleigh, North Carolina 27695-7616 (B.A.O., P.J.B.-K.).ORCID 0000-0003-4143-8909
Yang BianDepartment of Plant Pathology, North Carolina State University, Raleigh, North Carolina 27695-7616 (B.A.O., P.J.B.-K.).
Brian De VriesDepartment of Plant Pathology, North Carolina State University, Raleigh, North Carolina 27695-7616 (B.A.O., P.J.B.-K.).
William F TracyDepartment of Plant Pathology, North Carolina State University, Raleigh, North Carolina 27695-7616 (B.A.O., P.J.B.-K.).
Randall J WisserDepartment of Plant Pathology, North Carolina State University, Raleigh, North Carolina 27695-7616 (B.A.O., P.J.B.-K.).ORCID 0000-0003-1075-0115
James B HollandDepartment of Plant Pathology, North Carolina State University, Raleigh, North Carolina 27695-7616 (B.A.O., P.J.B.-K.).ORCID 0000-0002-4341-9675
Peter J Balint-KurtiDepartment of Plant Pathology, North Carolina State University, Raleigh, North Carolina 27695-7616 (B.A.O., P.J.B.-K.); peter.balint-kurti@ars.usda.gov.ORCID 0000-0002-3916-194X
Agricultural Research Service · USNorth Carolina State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Physiological leaf spotting, or flecking, is a mild-lesion phenotype observed on the leaves of several commonly used maize (Zea mays) inbred lines and has been anecdotally linked to enhanced broad-spectrum disease resistance. Flecking was assessed in the maize nested association mapping (NAM) population, comprising 4,998 recombinant inbred lines from 25 biparental families, and in an association population, comprising 279 diverse maize inbreds. Joint family linkage analysis was conducted with 7,386 markers in the NAM population. Genome-wide association tests were performed with 26.5 million single-nucleotide polymorphisms (SNPs) in the NAM population and with 246,497 SNPs in the association population, resulting in the identification of 18 and three loci associated with variation in flecking, respectively. Many of the candidate genes colocalizing with associated SNPs are similar to genes that function in plant defense response via cell wall modification, salicylic acid- and jasmonic acid-dependent pathways, redox homeostasis, stress response, and vesicle trafficking/remodeling. Significant positive correlations were found between increased flecking, stronger defense response, increased disease resistance, and increased pest resistance. A nonlinear relationship with total kernel weight also was observed whereby lines with relatively high levels of flecking had, on average, lower total kernel weight. We present evidence suggesting that mild flecking could be used as a selection criterion for breeding programs trying to incorporate broad-spectrum disease resistance.

Indexed as

AllelesChromosome MappingDisease ResistanceGenetics, PopulationGenome-Wide Association StudyInbreedingLightPhenotypePlant DiseasesPlant LeavesPolymorphism, Single NucleotideQuantitative Trait LociReactive Oxygen SpeciesSeedsZea maysReactive Oxygen Species

Identifiers

PMID27670817
PMCPMC5100796
OpenAlexW2526386417

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.