Evidence map›Paper›PMID 27670716›Full record

ArticleJournal of experimental botany2016

Growing Slowly 1 locus encodes a PLS-type PPR protein required for RNA editing and plant development in Arabidopsis.

Tingting Xie, Dan Chen, Jian Wu, Xiaorong Huang, Yifan Wang, Keli Tang, Jiayang Li, Mengxiang Sun, Xiongbo Peng

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 39 citations in OpenAlex.

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  12. Two interacting PPR proteins are major Arabidopsis editing factors in plastid and mitochondria.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  13. Article
  14. Testing Domestication Scenarios of Lima Bean (Frontiers in plant science · 2017
    Article
  15. Frontiers in plant science · 2017
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Tingting XieState Key Laboratory for Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.
Dan ChenState Key Laboratory for Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.
Jian WuState Key Laboratory of Plant Genomics and National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.
Xiaorong HuangState Key Laboratory for Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.
Yifan WangState Key Laboratory for Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.
Keli TangState Key Laboratory for Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.
Jiayang LiState Key Laboratory of Plant Genomics and National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.
Mengxiang SunState Key Laboratory for Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.
Xiongbo PengState Key Laboratory for Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China bobopx@whu.edu.cn.
Wuhan University · CNInstitute of Genetics and Developmental Biology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Most pentatricopeptide repeat (PPR) proteins are involved in organelle post-transcriptional processes, including RNA editing. The PPR proteins include the PLS subfamily, containing characteristic triplets of P, L, and S motifs; however, their editing mechanisms and roles in developmental processes are not fully understood. In this study, we isolated the Arabidopsis thaliana Growing slowly 1 (AtGRS1) gene and showed that it functions in RNA editing and plant development. Arabidopsis null mutants of grs1 exhibit slow growth and sterility. Further analysis showed that cell division activity was reduced dramatically in the roots of grs1 plants. We determined that GRS1 is a nuclear-encoded mitochondria-localized PPR protein, and is a member of the PLS subfamily. GRS1 is responsible for the RNA editing at four specific sites of four mitochondrial mRNAs: nad1-265, nad4L-55, nad6-103, and rps4-377 The first three of these mRNAs encode for the subunits of complex I of the electron transport chain in mitochondria. Thus, the activity of complex I is strongly reduced in grs1 Changes in RPS4 editing in grs1 plants affect mitochondrial ribosome biogenesis. Expression of the alternative respiratory pathway and the abscisic acid response gene ABI5 were up-regulated in grs1 mutant plants Genetic analysis revealed that ABI5 is involved in the short root phenotype of grs1 Taken together, our results indicate that AtGRS1 regulates plant development by controlling RNA editing in Arabidopsis.

Indexed as

ArabidopsisArabidopsis ProteinsCloning, MolecularGenes, PlantMitochondrial ProteinsPolymerase Chain ReactionRibosomesRNA EditingSubcellular FractionsArabidopsis ProteinsGRS1 protein, ArabidopsisMitochondrial Proteinspentatricopeptide repeat protein, ArabidopsisABI5mitochondriapentatricopeptide repeat proteinsRNA editingroot.

Identifiers

PMID27670716
PMCPMC5066490
OpenAlexW2526549317

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.