Evidence map›Paper›PMID 27669665›Full record

ArticleScientific reports2016

Immune Repertoire Diversity Correlated with Mortality in Avian Influenza A (H7N9) Virus Infected Patients.

Dongni Hou, Tianlei Ying, Lili Wang, Cuicui Chen, Shuihua Lu, Qin Wang, Eric Seeley, Jianqing Xu, Xiuhong Xi, Tao Li and 10 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 40 citations in OpenAlex.

  1. Selective decrease of donor-reactive TScience translational medicine · 2022
    Trial
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  4. Explore antibody repertoire in the era of AI.Acta biochimica et biophysica Sinica · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 8 institutions in 2 countries.

Dongni HouDepartment of Pulmonary Medicine, Zhongshan Hospital, Fudan University, Shanghai, 200032, China.
Tianlei YingKey Laboratory of Medical Molecular Virology of Ministries of Education and Health, School of Basic Medical Sciences, Fudan University, Shanghai, 200032, China.
Lili WangKey Laboratory of Medical Molecular Virology of Ministries of Education and Health, School of Basic Medical Sciences, Fudan University, Shanghai, 200032, China.
Cuicui ChenDepartment of Pulmonary Medicine, Zhongshan Hospital, Fudan University, Shanghai, 200032, China.
Shuihua LuDepartment of Respiratory Medicine, Shanghai Public Health Clinical Center, Fudan University, Shanghai, 201508, China.
Qin WangDepartment of Pulmonary Medicine, Zhongshan Hospital, Fudan University, Shanghai, 200032, China.
Eric SeeleyDivision of Pulmonary and Critical Care Medicine, Department of Medicine, University of California, San Francisco, CA 94143, USA.
Jianqing XuDepartment of Respiratory Medicine, Shanghai Public Health Clinical Center, Fudan University, Shanghai, 201508, China.
Xiuhong XiDepartment of Respiratory Medicine, Shanghai Public Health Clinical Center, Fudan University, Shanghai, 201508, China.
Tao LiDepartment of Respiratory Medicine, Shanghai Public Health Clinical Center, Fudan University, Shanghai, 201508, China.
Jie LiuDepartment of Pulmonary Medicine, Zhongshan Hospital, Fudan University, Shanghai, 200032, China.
Xinjun TangDepartment of Pulmonary Medicine, Zhongshan Hospital, Fudan University, Shanghai, 200032, China.
Zhiyong ZhangDepartment of Respiratory Medicine, Shanghai Public Health Clinical Center, Fudan University, Shanghai, 201508, China.
Jian ZhouDepartment of Pulmonary Medicine, Zhongshan Hospital, Fudan University, Shanghai, 200032, China.
Chunxue BaiDepartment of Pulmonary Medicine, Zhongshan Hospital, Fudan University, Shanghai, 200032, China.
Chunlin WangHudsonAlpha Institute for Biotechnology, Alabama, AL35806, USA.
Miranda Byrne-SteeleHudsonAlpha Institute for Biotechnology, Alabama, AL35806, USA.
Jieming QuDepartment of Pulmonary Medicine, Ruijin Hospital, Shanghai Jiaotong University, Shanghai, 200025, China.
Jian HanHudsonAlpha Institute for Biotechnology, Alabama, AL35806, USA.
Yuanlin SongDepartment of Pulmonary Medicine, Zhongshan Hospital, Fudan University, Shanghai, 200032, China.
Shanghai Public Health Clinical Center · CNFudan University · CNHudsonAlpha Institute for Biotechnology · USThe First Affiliated Hospital, Sun Yat-sen University · CNZhongshan Hospital · CNRuijin Hospital · CNSun Yat-sen University · CNUniversity of California, San Francisco · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Specific changes in immune repertoires at genetic level responding to the lethal H7N9 virus are still poorly understood. We performed deep sequencing on the T and B cells from patients recently infected with H7N9 to explore the correlation between clinical outcomes and immune repertoire alterations. T and B cell repertoires display highly dynamic yet distinct clonotype alterations. During infection, T cell beta chain repertoire continues to contract while the diversity of immunoglobulin heavy chain repertoire recovers. Patient recovery is correlated to the diversity of T cell and B cell repertoires in different ways - higher B cell diversity and lower T cell diversity are found in survivors. The sequences clonally related to known antibodies with binding affinity to H7 hemagglutinin could be identified from survivors. These findings suggest that utilizing deep sequencing may improve prognostication during influenza infection and could help in development of antibody discovery methodologies for the treatment of virus infection.

Identifiers

PMID27669665
PMCPMC5037391
OpenAlexW2525754298

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.