Evidence map›Paper›PMID 27669419›Full record

ArticleNature chemical biology2016

Thermal profiling reveals phenylalanine hydroxylase as an off-target of panobinostat.

Isabelle Becher, Thilo Werner, Carola Doce, Esther A Zaal, Ina Tögel, Crystal A Khan, Anne Rueger, Marcel Muelbaier, Elsa Salzer, Celia R Berkers and 3 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature chemical biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 106 papers.

0numbers the graph read from it
0cells of the map it votes in
106citing papers in PubMed
10.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

106 citing papers in PubMed, 252 citations in OpenAlex.

  1. Proteogenomic Analysis of HDAC4 and HDAC5 in Uveal Melanoma.Molecular medicine (Cambridge, Mass.) · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

46 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 3 countries.

Isabelle BecherCellzome GmbH, Heidelberg, Germany.
Thilo WernerCellzome GmbH, Heidelberg, Germany.
Carola DoceCellzome GmbH, Heidelberg, Germany.
Esther A ZaalBiomolecular Mass Spectrometry and Proteomics, Utrecht University, Utrecht, the Netherlands.ORCID http://orcid.org/0000-0001-9890-7345
Ina TögelCellzome GmbH, Heidelberg, Germany.
Crystal A KhanDepartment of Biochemistry, University of Texas Health Science Center, San Antonio, Texas, USA.
Anne RuegerCellzome GmbH, Heidelberg, Germany.
Marcel MuelbaierCellzome GmbH, Heidelberg, Germany.
Elsa SalzerCellzome GmbH, Heidelberg, Germany.
Celia R BerkersBiomolecular Mass Spectrometry and Proteomics, Utrecht University, Utrecht, the Netherlands.
Paul F FitzpatrickDepartment of Biochemistry, University of Texas Health Science Center, San Antonio, Texas, USA.
Marcus BantscheffCellzome GmbH, Heidelberg, Germany.ORCID http://orcid.org/0000-0002-8343-8977
Mikhail M SavitskiCellzome GmbH, Heidelberg, Germany.
European Molecular Biology Laboratory · DEThe University of Texas Health Science Center at San Antonio · USUtrecht University · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We describe a two-dimensional thermal proteome profiling strategy that can be combined with an orthogonal chemoproteomics approach to enable comprehensive target profiling of the marketed histone deacetylase inhibitor panobinostat. The N-hydroxycinnamide moiety is identified as critical for potent and tetrahydrobiopterin-competitive inhibition of phenylalanine hydroxylase leading to increases in phenylalanine and decreases in tyrosine levels. These findings provide a rationale for adverse clinical observations and suggest repurposing of the drug for treatment of tyrosinemia.

Indexed as

TemperatureDose-Response Relationship, DrugHep G2 CellsHistone Deacetylase InhibitorsHumansHydroxamic AcidsIndolesMolecular StructurePanobinostatPhenylalanine HydroxylaseStructure-Activity RelationshipHistone Deacetylase InhibitorsHydroxamic AcidsIndolesPanobinostatPhenylalanine Hydroxylase

Identifiers

PMID27669419
OpenAlexW2524972396

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.