Evidence map›Paper›PMID 27669036›Full record

ArticleNature structural & molecular biology2016

Skywalker-TBC1D24 has a lipid-binding pocket mutated in epilepsy and required for synaptic function.

Baptiste Fischer, Kevin Lüthy, Jone Paesmans, Charlotte De Koninck, Ine Maes, Jef Swerts, Sabine Kuenen, Valerie Uytterhoeven, Patrik Verstreken, Wim Versées

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In one paragraph

Article in Nature structural & molecular biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 63 citations in OpenAlex.

  1. Article
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  5. Biallelic variants in GTF3C3 result in an autosomal recessive disorder with intellectual disability.Genetics in medicine : official journal of the American College of Medical Genetics · 2025
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  12. Crystal structure of the TLDc domain of human NCOA7-AS.Acta crystallographica. Section F, Structural biology communications · 2021
    Article
  13. Article
  14. Article
  15. DOORS syndrome and a recurrent truncating ATP6V1B2 variant.Genetics in medicine : official journal of the American College of Medical Genetics · 2021
    Article
  16. Review
  17. Article
  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Baptiste FischerStructural Biology Research Center, VIB, Brussels, Belgium.
Kevin LüthyVIB Center for Brain &Disease Research, Leuven, Belgium.ORCID http://orcid.org/0000-0002-4510-3826
Jone PaesmansStructural Biology Research Center, VIB, Brussels, Belgium.
Charlotte De KoninckStructural Biology Research Center, VIB, Brussels, Belgium.
Ine MaesVIB Center for Brain &Disease Research, Leuven, Belgium.
Jef SwertsVIB Center for Brain &Disease Research, Leuven, Belgium.
Sabine KuenenVIB Center for Brain &Disease Research, Leuven, Belgium.
Valerie UytterhoevenVIB Center for Brain &Disease Research, Leuven, Belgium.
Patrik VerstrekenVIB Center for Brain &Disease Research, Leuven, Belgium.
Wim VerséesStructural Biology Research Center, VIB, Brussels, Belgium.
VIB-KU Leuven Center for Brain & Disease Research · BEVrije Universiteit Brussel · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mutations in TBC1D24 cause severe epilepsy and DOORS syndrome, but the molecular mechanisms underlying these pathologies are unresolved. We solved the crystal structure of the TBC domain of the Drosophila ortholog Skywalker, revealing an unanticipated cationic pocket conserved among TBC1D24 homologs. Cocrystallization and biochemistry showed that this pocket binds phosphoinositides phosphorylated at the 4 and 5 positions. The most prevalent patient mutations affect the phosphoinositide-binding pocket and inhibit lipid binding. Using in vivo photobleaching of Skywalker-GFP mutants, including pathogenic mutants, we showed that membrane binding via this pocket restricts Skywalker diffusion in presynaptic terminals. Additionally, the pathogenic mutations cause severe neurological defects in flies, including impaired synaptic-vesicle trafficking and seizures, and these defects are reversed by genetically increasing synaptic PI(4,5)P

Indexed as

AnimalsBinding SitesCarrier ProteinsCraniofacial AbnormalitiesCrystallography, X-RayDiffusionDrosophila melanogasterDrosophila ProteinsEpilepsyGTPase-Activating ProteinsHand Deformities, CongenitalHearing Loss, SensorineuralHumansIntellectual DisabilityMembrane ProteinsModels, MolecularCarrier ProteinsDrosophila ProteinsGTPase-Activating ProteinsMembrane ProteinsNerve Tissue ProteinsPhosphatidylinositolsPhosphoric Monoester Hydrolasesrab GTP-Binding Proteinssky protein, DrosophilasynaptojaninTBC1D24 protein, human

Identifiers

PMID27669036
OpenAlexW2524717647

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.