Evidence map›Paper›PMID 27668937›Full record

ArticleNature medicine2016

Efficient derivation of microglia-like cells from human pluripotent stem cells.

Julien Muffat, Yun Li, Bingbing Yuan, Maisam Mitalipova, Attya Omer, Sean Corcoran, Grisilda Bakiasi, Li-Huei Tsai, Patrick Aubourg, Richard M Ransohoff and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Nature medicine, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 425 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
425citing papers in PubMed, 1 pooled it
35.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

425 citing papers in PubMed, 1 synthesis or guideline pooled it, 649 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Functional genomic profiling of schizophrenia-associated genes reveals key microglial regulators.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2026
    Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Engineering brain organoids: from neurodevelopmental modeling to translational barriers.Journal of artificial organs : the official journal of the Japanese Society for Artificial Organs · 2026
    Review
  17. Review
  18. Review
  19. EBV Triggers a Distinct Antiviral Response in HMC3 Cells.bioRxiv : the preprint server for biology · 2026
    Article
  20. Article

365 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Julien MuffatWhitehead Institute for Biomedical Research, Cambridge, Massachusetts, USA.ORCID 0000-0003-1889-7023
Yun LiWhitehead Institute for Biomedical Research, Cambridge, Massachusetts, USA.ORCID 0000-0002-5849-5910
Bingbing YuanWhitehead Institute for Biomedical Research, Cambridge, Massachusetts, USA.
Maisam MitalipovaWhitehead Institute for Biomedical Research, Cambridge, Massachusetts, USA.
Attya OmerWhitehead Institute for Biomedical Research, Cambridge, Massachusetts, USA.
Sean CorcoranWhitehead Institute for Biomedical Research, Cambridge, Massachusetts, USA.
Grisilda BakiasiWhitehead Institute for Biomedical Research, Cambridge, Massachusetts, USA.
Li-Huei TsaiPicower Institute for Learning and Memory, Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.
Patrick AubourgUniversity of Paris-Sud, Institut National de la Santé et de la Recherche Médicale U1169, France.
Richard M RansohoffBiogen, Cambridge, Massachusetts, USA.ORCID 0000-0003-0175-6910
Rudolf JaenischWhitehead Institute for Biomedical Research, Cambridge, Massachusetts, USA.
Whitehead Institute for Biomedical Research · USUniversité Paris-Sud · FRBiogen (United States) · USBryn Mawr College · USMassachusetts Institute of Technology · US

Funding

GENOMIC IMPRINTING AND THE CLONING OF MICER37CA084198 · NCI · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI JAENISCH, RUDOLF · 2000 to 2008
$9.2M
In Vitro Reprogramming of Somatic Cells into Pluripotent ES-like CellsR37HD045022 · NICHD · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI JAENISCH, RUDOLF · 2009 to 2017
$7.5M
Transcriptional condensates, epigenetic editing and Rett SyndromeR01MH104610 · NIMH · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI JAENISCH, RUDOLF, YOUNG, RICHARD · 2014 to 2023
$7.4M
An iPSC based platform for functionally assessing genetic and environmental riskR01NS088538 · NINDS · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI JAENISCH, RUDOLF, MYERS, RICHARD H · 2014 to 2018
$5.0M
Nuclear Cloning and the Reprogramming of the GenomeR01HD045022 · NICHD · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI JAENISCH, RUDOLF · 2003 to 2008
$4.7M
Programming and Reprogramming Human CellsR01CA084198 · NCI · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI JAENISCH, RUDOLF · 2009 to 2013
$4.3M
Alzheimer's Disease Risk Genes in Human Microglia and Neurons Derived from iPSCsRF1AG048029 · NIA · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI TSAI, LI-HUEI · 2014 to 2014
$2.1M
Epigenomic Characterization of Alzheimer's Disease Neurons from iPSCsRF1AG042978 · NIA · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI HAGGARTY, STEPHEN J, TSAI, LI-HUEI · 2012 to 2012
$429k
Howard Hughes Medical InstituteNCI NIH HHS R01 CA084198NCI NIH HHS R37 CA084198NIA NIH HHS RF1 AG042978NIA NIH HHS RF1 AG048029NICHD NIH HHS R01 HD045022NICHD NIH HHS R37 HD045022NIMH NIH HHS R01 MH104610NINDS NIH HHS R01 NS088538
6 · The paper itself

Abstract

Microglia, the only lifelong resident immune cells of the central nervous system (CNS), are highly specialized macrophages that have been recognized to have a crucial role in neurodegenerative diseases such as Alzheimer's, Parkinson's and adrenoleukodystrophy (ALD). However, in contrast to other cell types of the human CNS, bona fide microglia have not yet been derived from cultured human pluripotent stem cells. Here we establish a robust and efficient protocol for the rapid production of microglia-like cells from human (h) embryonic stem (ES) and induced pluripotent stem (iPS) cells that uses defined serum-free culture conditions. These in vitro pluripotent stem cell-derived microglia-like cells (termed pMGLs) faithfully recapitulate the expected ontogeny and characteristics of their in vivo counterparts, and they resemble primary fetal human and mouse microglia. We generated these cells from multiple disease-specific cell lines and find that pMGLs derived from an hES model of Rett syndrome are smaller than their isogenic controls. We further describe a platform to study the integration and live behavior of pMGLs in organotypic 3D cultures. This modular differentiation system allows for the study of microglia in highly defined conditions as they mature in response to developmentally relevant cues, and it provides a framework in which to study the long-term interactions of microglia residing in a tissue-like environment.

Indexed as

Cell DifferentiationHuman Embryonic Stem CellsHumansInduced Pluripotent Stem CellsIn Vitro TechniquesMicrogliaOrgan Culture TechniquesRett Syndrome

Identifiers

PMID27668937
PMCPMC5101156
OpenAlexW2525538087

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.